YRC Public Data Repository - Protein Structure Prediction

Protein:	ATP14
Organism:	Saccharomyces cerevisiae
Length:	124 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATP14.

Description	E-value	Query Range	Subject Range
gi\|49641564, gi\|... - gi\|49641564\|emb\|CAH01282.1\| KLLA0C05170p [Kluyveromyces lactis], gi\|49640330\|emb\|CAH02787.1\| KLLA0A0... gi\|50302529, gi\|... - gi\|50304947\|ref\|XP_452431.1\| unnamed protein product [Kluyveromyces lactis], gi\|50302529\|ref\|XP_4511...	102.0	[0..16]	[119..5]
gi\|50289693, gi\|... - gi\|50289693\|ref\|XP_447278.1\| hypothetical protein CAGL0I00572g [Candida glabrata CBS138], gi\|4952658... gi\|49526588 - gi\|49526588\|emb\|CAG60215.1\| unnamed protein product [Candida glabrata]	101.0	[0..18]	[118..2]
gi\|51895753 - gi\|51895753\|gb\|AAS54785.2\| AGR295Cp [Ashbya gossypii ATCC 10895] gi\|51895753, gi\|... - gi\|54299402\|ref\|NP_986961.2\| AGR295Cp [Ashbya gossypii ATCC 10895], gi\|51895753\|gb\|AAS54785.2\| AGR29...	88.0	[0..1]	[124..1]
gi\|49656121, gi\|... - gi\|50423735\|ref\|XP_460452.1\| hypothetical protein DEHA0F02288g [Debaryomyces hansenii CBS767], gi\|49... gi\|49656121 - gi\|49656121\|emb\|CAG88759.1\| DEHA2F02024p [Debaryomyces hansenii]	61.0	[0..23]	[118..13]
gi\|49650876 - gi\|49650876\|emb\|CAG77813.1\| YALI0F04774p [Yarrowia lipolytica] gi\|49650876, gi\|... - gi\|50555195\|ref\|XP_505006.1\| YALI0F04774p [Yarrowia lipolytica], gi\|49650876\|emb\|CAG77813.1\| unnamed...	60.0	[0..23]	[118..10]
gi\|111063071 - gi\|111063071\|gb\|EAT84191.1\| predicted protein [Phaeosphaeria nodorum SN15]	57.0	[0..33]	[124..96]
gi\|39950808, gi\|... - gi\|39950808\|ref\|XP_363324.1\| hypothetical protein MG01250.4 [Magnaporthe grisea 70-15], gb\|EAA55599....	53.0	[0..23]	[124..27]
gi\|240108301 - gi\|240108301\|gb\|EER26475.1\| hypothetical protein CPC735_006470 [Coccidioides posadasii C735 delta SO... gi\|90302971, gi\|... - gi\|90302971\|gb\|EAS32602.1\| hypothetical protein CIMG_03626 [Coccidioides immitis RS], gi\|119187157\|r...	52.0	[0..5]	[124..8]
gi\|42545641, gi\|... - gi\|46107176\|ref\|XP_380647.1\| hypothetical protein FG00471.1 [Gibberella zeae PH-1], gi\|42545641\|gb\|E...	50.0	[0..23]	[124..30]
gi\|114193339, gi... - gi\|115396262\|ref\|XP_001213770.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	47.0	[0..5]	[107..8]

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Predicted Domain #1

Region A:
Residues: [1-124]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPIASRRIL LNASVLPLRL CNRNFTTTRI SYNVIQDLYL RELKDTKLAP STLQDAEGNV  60
   61 KPWNPPQKPN LPELELQGPE ALKAYTEQNV ETAHVAKESE EGESEPIEED WLVLDDAEET 120
  121 KESH

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.600	a.100.1	6-phosphogluconate dehydrogenase C-terminal domain-like
View	Download	0.403	a.39.1	EF-hand
View	Download	0.384	c.23.1	CheY-like
View	Download	0.376	a.24.11	Bacterial GAP domain
View	Download	0.373	d.110.4	SNARE-like

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits