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View Structure Prediction Details

Protein: BOP2
Organism: Saccharomyces cerevisiae
Length: 570 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BOP2.

Description E-value Query
Range
Subject
Range
BOP2_YEAST - Protein BOP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BOP2 PE=1 SV=1
BOP2 - Protein of unknown function
0.0 [1..570] [1..570]

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Predicted Domain #1
Region A:
Residues: [1-570]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAALTYLPT ELIQRIFEFT VVETDSQYWL YNLVALIDFS VSSRGGGSIT EDFLTNYVRK  60
   61 NLMVLDLTCE ATQDSILRAE YGFLKRLLPY IDMDAQYIRV VDLETNADKA QNLKAEKLIV 120
  121 IFDEFSDLKL IETFFPLANS NSNIIEFVFC VRNIKSSFYS PLEKLHIANI VADIDINTLY 180
  181 LDFVDSNIYS DQNFFGIFDP DIFQLINKNY RNFFSKTNEK GKKRPPICKK ICFPFVETLN 240
  241 LDYMALDSFF NSILHKLTTK IKTFERNNEF DVDKNLNLNS TTTVAALIIK SILQQFFNNF 300
  301 HISFPNLVTL NFIKMSTYPN NNEITQCCNF IDLSSYVLNK CLSENISINF LFQLHSLKNW 360
  361 SMPKIKEFTG HKFKYDETTF SGSPERYIKS LRGNIKILQE MAINETNDGT CYFRVKLIPE 420
  421 GVEKTQIINW IPFTSSFSDD TFKQRHHLKR PMICLKNNSL RSLTVKIIRI EKCSSIRIQG 480
  481 FYLPNLQELF INNTLCDTTQ HQKQASNDMS CIEFTSWNEL PQCKKLGFAQ LEDDSNYVLN 540
  541 ISNLQDHLPN LDLRESFPTF FDIRQKFVVV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle