| Protein: | SEC10 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 871 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEC10.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..871] | [1..871] |
|
|
0.0 | [74..856] | [55..790] |
|
|
0.0 | [171..857] | [199..916] |
|
|
0.0 | [89..722] | [178..830] |
|
|
0.0 | [407..857] | [55..483] |
|
|
0.0 | [69..522] | [38..437] |
|
|
0.0 | [69..522] | [38..437] |
|
Region A: Residues: [1-53] |
1 11 21 31 41 51
| | | | | |
1 MNSLYELDPK WKKLLKTDNF LGGLTVNEFV QELSKDHRND VLIDANTKNL PTN
|
| Detection Method: |  |
| Confidence: | 7.61 |
| Match: | 1n1bA |
| Description: | (+)-bornyl diphosphate synthase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transferase activity | 1.23691661617212 | bayes_pls_golite062009 |
| binding | 0.852864552336195 | bayes_pls_golite062009 |
| prenyltransferase activity | 0.682614631553219 | bayes_pls_golite062009 |
| transferase activity, transferring alkyl or aryl (other than methyl) groups | 0.511023604744394 | bayes_pls_golite062009 |
| protein binding | 0.293934403462758 | bayes_pls_golite062009 |
| catalytic activity | 0.281213321242747 | bayes_pls_golite062009 |
|
Region A: Residues: [54-393] |
1 11 21 31 41 51
| | | | | |
1 EKDQDAIREA IWKQLDPKPY IRTFESTLKE LKNLNEETLN KRQYFSEQVA TQEVIHSENV 60
61 IKLSKDLHTT LLTFDKLDDR LTNVTQVVSP LGDKLETAIK KKQNYIQSVE LIRRYNDFYS 120
121 MGKSDIVEQL RLSKNWKLNL KSVKLMKNLL ILSSKLETSS IPKTINTKLV IEKYSEMMEN 180
181 ELLENFNSAY RENNFTKLNE IAIILNNFNG GVNVIQSFIN QHDYFIDTKQ IDLENEFENV 240
241 FIKNVKFKEQ LIDFENHSVI IETSMQNLIN DVETVIKNES KIVKRVFEEK ATHVIQLFIQ 300
301 RVFAQKIEPR FEVLLRNSLS ISNLAYVRIL HGLFTLFGKF
|
| Detection Method: | |
| Confidence: | 8.74 |
| Match: | 1qgkA |
| Description: | Importin beta |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [394-467] |
1 11 21 31 41 51
| | | | | |
1 TKSLIDYFQL LEIDDSNQIL STTLEQCFAD LFSHYLYDRS KYFGIEKRSL EAILVDMTSK 60
61 FTVNYDKEIN KRVL
|
| Detection Method: | |
| Confidence: | 8.74 |
| Match: | 1qgkA |
| Description: | Importin beta |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [468-610] |
1 11 21 31 41 51
| | | | | |
1 LDKYKEKLST NVDAFMHSPR GNTHSRQDST SRSKLSQFNS FLKTHLDKDH LSLNRTNTLS 60
61 DSFNNSSSST QYDVANNSSS LVNSSFTASD IDNSPNSPAN YSLNDVDSML KCVVESTARV 120
121 MELIPNKAHL YILEILKIMF LGI
|
| Detection Method: | |
| Confidence: | 8.74 |
| Match: | 1qgkA |
| Description: | Importin beta |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [611-871] |
1 11 21 31 41 51
| | | | | |
1 VDSYMEIALE VAYWKICKVD INKTAGVVNL NFLKFISMST EILDLLSISI KSIFLPLLNN 60
61 SPEIKAQIIE MTNSQIQKME ILINIILQET ITVISTKFSA ILCKQKKKDF VPKSQELLDQ 120
121 DTLPAIEIVN ILNLIFEQSS KFLKGKNLQT FLTLIGEELY GLLLSHYSHF QVNSIGGVVV 180
181 TKDIIGYQTA IEDWGVASLI DKFATLRELA NLFTVQPELL ESLTKEGHLA DIGRDIIQSY 240
241 ISNREDFNHD NFINSVKLNF R
|
| Detection Method: | |
| Confidence: | 8.74 |
| Match: | 1qgkA |
| Description: | Importin beta |
| Matching Structure (courtesy of the PDB): |
|
