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View Structure Prediction Details

Protein: YLR156W, YLR159W...
Organism: Saccharomyces cerevisiae
Length: 114 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLR156W, YLR159W....

Description E-value Query
Range
Subject
Range
YL57D_YEAST - Putative uncharacterized protein YLR157W-D OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ...
YLR157W-D - Putative protein of unknown function; identified by gene-trapping, microarray-based expression analy...
147.0 [0..1] [70..1]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFQYALAKE QLGSNSRSGV KKLISKHHWL PEYYFSDLSF SVVQQWDSRA IEKTTIISCM  60
   61 RPANQEIYPL RHCETLRSQP CSLFSSLYAR SFQSSCTLHV AEPSPGFHMY GCHT

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.408 a.4.1 Homeodomain-like
View Download 0.408 a.4.1 Homeodomain-like
View Download 0.376 a.4.1 Homeodomain-like
View Download 0.343 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.339 a.28.3 Retrovirus capsid protein C-terminal domain
View Download 0.339 a.28.3 Retrovirus capsid protein C-terminal domain
View Download 0.303 a.4.1 Homeodomain-like
View Download 0.289 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.255 a.118.8 TPR-like
View Download 0.241 c.59.1 MurD-like peptide ligases, peptide-binding domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle