Protein: | CLF1 |
Organism: | Saccharomyces cerevisiae |
Length: | 687 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLF1.
Description | E-value | Query Range |
Subject Range |
|
346.0 | [0..13] | [673..29] |
|
342.0 | [0..12] | [678..202] |
|
324.0 | [0..6] | [685..182] |
|
323.0 | [0..14] | [679..356] |
|
318.0 | [0..6] | [685..127] |
Region A: Residues: [1-154] |
1 11 21 31 41 51 | | | | | | 1 MDTLEPTAVD THVSAEQILR DVYKKGQKAR GSTNIDILDL EELREYQRRK RTEYEGYLKR 60 61 NRLDMGQWIR YAQFEIEQHD MRRARSIFER ALLVDSSFIP LWIRYIDAEL KVKCINHARN 120 121 LMNRAISTLP RVDKLWYKYL IVEESLNNVE IVRS |
Detection Method: | |
Confidence: | 9.522879 |
Match: | 1a17A |
Description: | TETRATRICOPEPTIDE REPEATS OF PROTEIN PHOSPHATASE 5 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [155-257] |
1 11 21 31 41 51 | | | | | | 1 LYTKWCSLEP GVNAWNSFVD FEIRQKNWNG VREIYSKYVM AHPQMQTWLK WVRFENRHGN 60 61 TEFTRSVYSL AIDTVANLQN LQIWSDMEVA KLVNSFAHWE AAQ |
Region A: Residues: [258-349] |
1 11 21 31 41 51 | | | | | | 1 QEYERSSALY QIAIEKWPSN QLLKAGLLDF EKQFGDINSI EETISYKRKM EYETILSNNA 60 61 YDYDTWWLYL DLISESFPKQ IMQTFEKAIV DS |
Region A: Residues: [350-451] |
1 11 21 31 41 51 | | | | | | 1 RPKELSKNVQ WKRYIYLWMR YICYVELELE NSLLEEELFQ RLIDDIIPHK HFTFSKIWLM 60 61 YAKFLIRHDD VPKARKILGK AIGLCPKAKT FKGYIELEVK LK |
Detection Method: | |
Confidence: | 35.0 |
Match: | 1fchA |
Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [452-525] |
1 11 21 31 41 51 | | | | | | 1 EFDRVRKIYE KFIEFQPSDL QIWSQYGELE ENLGDWDRVR GIYTIALDEN SDFLTKEAKI 60 61 VLLQKYITFE TESQ |
Detection Method: | |
Confidence: | 35.0 |
Match: | 1fchA |
Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [526-625] |
1 11 21 31 41 51 | | | | | | 1 EFEKARKLYR RYLELNQYSP QSWIEFAMYQ TSTPTEQQLL DLAKLQSENV DEDIEFEITD 60 61 ENKLEARKVF EEAIVFFKEK DDKQGRLSIL EALKDYEETY |
Detection Method: | |
Confidence: | 35.0 |
Match: | 1fchA |
Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [626-687] |
1 11 21 31 41 51 | | | | | | 1 GTELDQETVK KRFPKVIKKV RLQNGVEEEF VDYIFPDDID DDKPKPSKFL ELAKKWKQEQ 60 61 AL |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.