| Protein: | CLF1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 687 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLF1.
| Description | E-value | Query Range |
Subject Range |
|
|
346.0 | [0..13] | [673..29] |
|
|
342.0 | [0..12] | [678..202] |
|
|
324.0 | [0..6] | [685..182] |
|
|
323.0 | [0..14] | [679..356] |
|
|
318.0 | [0..6] | [685..127] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MDTLEPTAVD THVSAEQILR DVYKKGQKAR GSTNIDILDL EELREYQRRK RTEYEGYLKR 60
61 NRLDMGQWIR YAQFEIEQHD MRRARSIFER ALLVDSSFIP LWIRYIDAEL KVKCINHARN 120
121 LMNRAISTLP RVDKLWYKYL IVEESLNNVE IVRS
|
| Detection Method: |  |
| Confidence: | 9.522879 |
| Match: | 1a17A |
| Description: | TETRATRICOPEPTIDE REPEATS OF PROTEIN PHOSPHATASE 5 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [155-257] |
1 11 21 31 41 51
| | | | | |
1 LYTKWCSLEP GVNAWNSFVD FEIRQKNWNG VREIYSKYVM AHPQMQTWLK WVRFENRHGN 60
61 TEFTRSVYSL AIDTVANLQN LQIWSDMEVA KLVNSFAHWE AAQ
|
| Detection Method: | |
| Confidence: | 13.98 |
| Match: | |
| Description: | No description for 1ihgA was found. |
|
Region A: Residues: [258-349] |
1 11 21 31 41 51
| | | | | |
1 QEYERSSALY QIAIEKWPSN QLLKAGLLDF EKQFGDINSI EETISYKRKM EYETILSNNA 60
61 YDYDTWWLYL DLISESFPKQ IMQTFEKAIV DS
|
| Detection Method: | |
| Confidence: | 13.98 |
| Match: | |
| Description: | No description for 1ihgA was found. |
|
Region A: Residues: [350-451] |
1 11 21 31 41 51
| | | | | |
1 RPKELSKNVQ WKRYIYLWMR YICYVELELE NSLLEEELFQ RLIDDIIPHK HFTFSKIWLM 60
61 YAKFLIRHDD VPKARKILGK AIGLCPKAKT FKGYIELEVK LK
|
| Detection Method: | |
| Confidence: | 35.0 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [452-525] |
1 11 21 31 41 51
| | | | | |
1 EFDRVRKIYE KFIEFQPSDL QIWSQYGELE ENLGDWDRVR GIYTIALDEN SDFLTKEAKI 60
61 VLLQKYITFE TESQ
|
| Detection Method: | |
| Confidence: | 35.0 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [526-625] |
1 11 21 31 41 51
| | | | | |
1 EFEKARKLYR RYLELNQYSP QSWIEFAMYQ TSTPTEQQLL DLAKLQSENV DEDIEFEITD 60
61 ENKLEARKVF EEAIVFFKEK DDKQGRLSIL EALKDYEETY
|
| Detection Method: | |
| Confidence: | 35.0 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [626-687] |
1 11 21 31 41 51
| | | | | |
1 GTELDQETVK KRFPKVIKKV RLQNGVEEEF VDYIFPDDID DDKPKPSKFL ELAKKWKQEQ 60
61 AL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
