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View Structure Prediction Details

Protein: YLR111W
Organism: Saccharomyces cerevisiae
Length: 110 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YLR111W.

Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNSKTNGFF TPEKYLYGII QGLPPTLRGL AFIFFFLVAF YFFPAFWDLC GVLRGARGKG  60
   61 FPKRKSDANS QHSKQFWTHS DFPIWFLRVL IPTRASINSM KYPHTAALVR 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.402 a.118.8 TPR-like
View Download 0.402 a.118.8 TPR-like
View Download 0.391 a.29.13 Description not found.
View Download 0.352 a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.318 a.29.13 Description not found.
View Download 0.314 a.25.1 Ferritin-like
View Download 0.278 a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
View Download 0.258 f.17.1 F1F0 ATP synthase subunit C
View Download 0.254 a.177.1 Sigma2 domain of RNA polymerase sigma factors


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle