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View Structure Prediction Details

Protein: APC9
Organism: Saccharomyces cerevisiae
Length: 265 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APC9.

Description E-value Query
Range
Subject
Range
APC9 - Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), which is a ubiquitin-protein ligase req...
gi|207343091 - gi|207343091|gb|EDZ70658.1| YLR102Cp-like protein [Saccharomyces cerevisiae AWRI1631]
APC9_YEAST - Anaphase-promoting complex subunit 9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APC...
gi|190406138 - gi|190406138|gb|EDV09405.1| anaphase promoting complex subunit 9 [Saccharomyces cerevisiae RM11-1a]
0.0 [1..265] [1..265]

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Predicted Domain #1
Region A:
Residues: [1-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQNGDKNEG KLFQLPSLPP WKTPRFNKAN FNNFTTPLRK RSTRVINDDS MPITGEVLEE  60
   61 RTADDLYGIN MDVDEVDYLN TLSHIEEEKQ YDYSPFCERN TLRESRIDSF LKAERAAHCL 120
  121 VFHKVGHLDG IDSYRPDIDI MCGEEANKYD SANPEGNGSM LLESVPGCNK EDLERLSRRE 180
  181 FVTNSKPNMR RLDDIINHET NALKSFWNDS GLVNSLQSHH LHEEYLLLQE ELKNVYKIKC 240
  241 HDRVPIESLR DKCRRHYSNE DSSFL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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