| Protein: | HRT3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 344 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HRT3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..344] | [1..344] |
|
|
0.0 | [7..340] | [185..539] |
|
|
0.0 | [7..340] | [85..439] |
|
|
0.0 | [7..340] | [74..428] |
|
|
4.0E-48 | [87..252] | [46..194] |
|
Region A: Residues: [1-73] |
1 11 21 31 41 51
| | | | | |
1 MIVDYEKDPR AKEAIAIWEK GVLKEKDGSM SDAINFYRSA LKIHDNVESL YRKKILDEWM 60
61 LHKKLSGLSM TTD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.905 | 0.987 | nuclear ubiquitin ligase complex | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [74-189] |
1 11 21 31 41 51
| | | | | |
1 APDEQNETGK DDLSVEENAE LQPCWILEIL PDDILLRIIK KVILMSGESW VNLSMTCSTF 60
61 SKLCFHDSVP FKTFAKYIYS KQIYDKMAMD LNGITDINTF EKEIWRGDDY RMLRER
|
| Detection Method: | |
| Confidence: | 2.481486 |
| Match: | PF00646 |
| Description: | F-box domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [190-344] |
1 11 21 31 41 51
| | | | | |
1 PYIKFEGVYI SVVNYVRYGS NAESSLSLLK PVHMITYYRY FRFYENGQCL RLLSTDEPSA 60
61 VVKHFSKENK PRHSHMCYWS LGFDYDFGHL KITRSDEKYT FIEEFQIKNQ GNKRYQRLKW 120
121 LSSIVVDKEG NASNCSLRNE KSFFFSRVKS FKDPG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
