| Protein: | CSF1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 2958 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSF1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..2958] | [1..2958] |
|
|
0.0 | [379..704] | [587..893] |
|
Region A: Residues: [1-416] |
1 11 21 31 41 51
| | | | | |
1 MEAISQLRGV PLTHQKDFSW VFLVDWILTV VVCLTMIFYM GRIYAYLVSF ILEWLLWKRA 60
61 KIKINVETLR VSLLGGRIHF KNLSVIHKDY TISVLEGSLT WKYWLLNCRK AELIENNKSS 120
121 SGKKAKLPCK ISVECEGLEI FIYNRTVAYD NVINLLSKDE RDKFEKYLNE HSFPEPFSDG 180
181 SSADKLDEDL SESAYTTNSD ASIVNDRDYQ ETDIGKHPKL LMFLPIELKF SRGSLLLGNK 240
241 FTPSVMILSY ESGKGIIDVL PPKERLDLYR NKTQMEFKNF EISIKQNIGY DDAIGLKFKI 300
301 DRGKVSKLWK TFVRVFQIVT KPVVPKKTKK SAGTSDDNFY HKWKGLSLYK ASAGDAKASD 360
361 LDDVEFDLTN HEYAKFTSIL KCPKVTIAYD VDVPGVVPHG AHPTIPDIDG PDVGNN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [417-738] |
1 11 21 31 41 51
| | | | | |
1 GAPPDFALDV QIHGGSICYG PWAQRQVSHL QRVLSPVVSR TAKPIKKLPP GSRRIYTLFR 60
61 MNISIMEDTT WRIPTRESSK DPEFLKHYKE TNEEYRPFGW MDLRFCKDTY ANFNISVCPT 120
121 VQGFQNNFHV HFLETEIRSS VNHDILLKSK VFDIDGDIGY PLGWNSKAIW IINMKSEQLE 180
181 AFLLREHITL VADTLSDFSA GDPTPYELFR PFVYKVNWEM EGYSIYLNVN DHNIVNNPLD 240
241 FNENCYLSLH GDKLSIDVTV PRESILGTYT DMSYEISTPM FRMMLNTPPW NTLNEFMKHK 300
301 EVGRAYDFTI KGSYLLYSEL DI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [739-2958] |
1 11 21 31 41 51
| | | | | |
1 DNVDTLVIEC NSKSTVLHCY GFVMRYLTNV KMNYFGEFFN FVTSEEYTGV LGAREVGDVT 60
61 TKSSVADLAS TVDSGYQNSS LKNESEDKGP MKRSDLKRTT NETDIWFTFS VWDGALILPE 120
121 TIYSFDPCIA LHFAELVVDF RSCNYYMDIM AVLNGTSIKR HVSKQINEVF DFIRRNNGAD 180
181 EQEHGLLSDL TIHGHRMYGL PPTEPTYFCQ WDINLGDLCI DSDIEFIKGF FNSFYKIGFG 240
241 YNDLENILLY DTETINDMTS LTVHVEKIRI GLKDPVMKSQ SVISAESILF TLIDFENEKY 300
301 SQRIDVKIPK LTISLNCVMG DGVDTSFLKF ETKLRFTNFE QYKDIDKKRS EQRRYITIHD 360
361 SPYHRCPFLL PLFYQDSDTY QNLYGAIAPS SSIPTLPLPT LPDTIDYIIE DIVGEYATLL 420
421 ETTNPFKNIF AETPSTMEPS RASFSEDDND EEADPSSFKP VAFTEDRNHE RDNYVVDVSY 480
481 ILLDVDPLLF IFAKSLLEQL YSENMVQVLD DIEIGIVKRL SNLQEGITSI SNIDIHIAYL 540
541 NLIWQETGEE GFELYLDRID YQMSEKSLEK NRTNKLLEVA ALAKVKTVRV TVNQKKNPDL 600
601 SEDRPPALSL GIEGFEVWSS TEDRQVNSLN LTSSDITIDE SQMEWLFEYC SDQGNLIQEV 660
661 CTSFNSIQNT RSNSKTELIS KLTAASEYYQ ISHDPYVITK PAFIMRLSKG HVRENRSWKI 720
721 ITRLRHILTY LPDDWQSNID EVLKEKKYTS AKDAKNIFMS VFSTWRNWEF SDVARSYIYG 780
781 KLFTAENEKH KQNLIKKLLK CTMGSFYLTV YGEGYEVEHN FVVADANLVV DLTPPVTSLP 840
841 SNREETIEIT GRVGSVKGKF SDRLLKLQDL IPLIAAVGED DKSDPKKELS KQFKMNTVLL 900
901 VDKSELQLVM DQTKLMSRTV GGRVSLLWEN LKDSTSQAGS LVIFSQKSEV WLKHTSVILG 960
961 EAQLRDFSVL ATTEAWSHKP TILINNQCAD LHFRAMSSTE QLVTAITEIR ESLMMIKERI1020
1021 KFKPKSKKKS QFVDQKINTV LSCYFSNVSS EVMPLSPFYI RHEAKQLDIY FNKFGSNEIL1080
1081 LSIWDTDFFM TSHQTKEQYL RFSFGDIEIK GGISREGYSL INVDISISMI KLTFSEPRRI1140
1141 VNSFLQDEKL ASQGINLLYS LKPLFFSSNL PKKEKQAPSI MINWTLDTSI TYFGVLVPVA1200
1201 STYFVFELHM LLLSLTNTNN GMLPEETKVT GQFSIENILF LIKERSLPIG LSKLLDFSIK1260
1261 VSTLQRTVDT EQSFQVESSH FRVCLSPDSL LRLMWGAHKL LDLSHYYSRR HAPNIWNTKM1320
1321 FTGKSDKSKE MPINFRSIHI LSYKFCIGWI FQYGAGSNPG LMLGYNRLFS AYEKDFGKFT1380
1381 VVDAFFSVAN GNTSSTFFSE GNEKDKYNRS FLPNMQISYW FKRCGELKDW FFRFHGEALD1440
1441 VNFVPSFMDV IESTLQSMRA FQELKKNILD VSESLRAEND NSYASTSVES ASSSLAPFLD1500
1501 NIRSVNSNFK YDGGVFRVYT YEDIETKSEP SFEIKSPVVT INCTYKHDED KVKPHKFRTL1560
1561 ITVDPTHNTL YAGCAPLLME FSESLQKMIK KHSTDEKPNF TKPSSQNVDY KRLLDQFDVA1620
1621 VKLTSAKQQL SLSCEPKAKV QADVGFESFL FSMATNEFDS EQPLEFSLTL EHTKASIKHI1680
1681 FSREVSTSFE VGFMDLTLLF THPDVISMYG TGLVSDLSVF FNVKQLQNLY LFLDIWRFSS1740
1741 ILHTRPVQRT VNKEIEMSSL TSTNYADAGT EIPWCFTLIF TNVSGDVDLG PSLGMISLRT1800
1801 QRTWLATDHY NEKRQLLHAF TDGISLTSEG RLSGLFEVAN ASWLSEVKWP PEKSKNTHPL1860
1861 VSTSLNIDDI AVKAAFDYHM FLIGTISNIH FHLHNEKDAK GVLPDLLQVS FSSDEIILSS1920
1921 TALVVANILD IYNTIVRMRQ DNKISYMETL RDSNPGESRQ PILYKDILRS LKLLRTDLSV1980
1981 NISSSKVQIS PISLFDVEVL VIRIDKVSIR SETHSGKKLK TDLQLQVLDV SAALSTSKEE2040
2041 LDEEVGASIA IDDYMHYASK IVGGTIIDIP KLAVHMTTLQ EEKTNNLEYL FACSFSDKIS2100
2101 VRWNLGPVDF IKEMWTTHVK ALAVRRSQVA NISFGQTEEE LEESIKKEEA ASKFNYIALE2160
2161 EPQIEVPQIR DLGDATPPME WFGVNRKKFP KFTHQTAVIP VQKLVYLAEK QYVKILDDTH2220
2221
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
