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View Structure Prediction Details

Protein: SRL2
Organism: Saccharomyces cerevisiae
Length: 392 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRL2.

Description E-value Query
Range
Subject
Range
SRL2_YEAST - Protein SRL2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SRL2 PE=1 SV=1
SRL2 - Protein of unknown function; overexpression suppresses the lethality caused by a rad53 null mutation
0.0 [1..392] [1..392]

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Predicted Domain #1
Region A:
Residues: [1-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNFKNFTLN SFEDYYGKPS ETPKMEEEKL EVTNVNASSS KKVHKSKKST SKYDQKNVFR  60
   61 NSMTGIAQIL PTKPVKIIEQ NIDFANPKSF DLLQSTHTIC FNKRINTTNT KLNVETHTSS 120
  121 DIDNDILHVG APTDLGGNSN DEAETRQLRK FRWSNNKEKS LCEKLTVIYW ALLLHTTKRA 180
  181 SKRRPILCHQ MIAEFFNRVY KEKSRVPITS RYIRDNLVAW VTQGKELHEK GWVGDAKTGD 240
  241 LQEQFNIATV KLYESAEDGR LSIGKDKPFR EENTGSDSLV RAEEDSTAVT NENGHISSEK 300
  301 NLKKDRRESI RNQILTLDLN DEDFFQNVMK VLSAIDEPEL RQYVIVISEL VSMEMDDGKT 360
  361 VREKLRDVEL NINRLQVDIK EIKEMLVTLI NK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle