| Protein: | FMP25 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 583 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FMP25.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..583] | [1..583] |
|
|
6.0E-95 | [3..512] | [3876..4322] |
|
|
8.0E-73 | [161..572] | [5..385] |
|
|
8.0E-72 | [161..567] | [5..380] |
|
|
1.0E-70 | [191..576] | [17..355] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MSFRLFTRTS QRLPRLNWVS PIRRYAKQPQ YDEAELFAEN INHGAYKAKK RPSDEHFQWP 60
61 EKSPDQITKE SELQWERMAK LSAVGQGILI LVVVGGLGTA YLRWPELKSW WLIKMNGGRI 120
121 NATQEQSGQD SLEKLIRQKA KNLLREIPQV PAFQLGID
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [159-583] |
1 11 21 31 41 51
| | | | | |
1 HPGVYIWGRC HSKDSLFPVR VPNLDGRKFR DILLAPSDDF NTNFAIDEKG DLISWDDLGQ 60
61 TKTILPDQDL TSMKYSSHFL YALNKKGEIL VIPIRTPDLI ASQVSSRRSK LLPWKTKLRY 120
121 DWKLQTNQIF NGKEGEKRVV QFDAGSHHLV LLSNLGKAYC CATGNDQKQA QVSKGQFGIP 180
181 TFSQFDEFPP NNQLFEIELL NKFKHEGEDV VRKREIKKIA CGSYHTLAID KTGEIYAFGW 240
241 NRFGQLALPI SYNLEYVSFP RSVTHAFKPH FPGMTNWKCV DIHCDDETSF VTIRKPGSTS 300
301 DHHYFAFGNG LFGELGNNTF KNSQCDPIKI KSDDKKLTNW SCGSHCVFTE TEQENEVIAW 360
361 GNNDHGQLGI GKKTMKCAKP MNIPEVLKPG QDTTDLDSIY NSKLHLKKEQ RVVTNGNKSC 420
421 LYWRV
|
| Detection Method: | |
| Confidence: | 101.0 |
| Match: | 1a12A_ |
| Description: | Regulator of chromosome condensation RCC1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.139824392251248 | bayes_pls_golite062009 |
