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View Structure Prediction Details

Protein: YLR049C
Organism: Saccharomyces cerevisiae
Length: 428 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLR049C.

Description E-value Query
Range
Subject
Range
gi|151941217 - gi|151941217|gb|EDN59595.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|207343158 - gi|207343158|gb|EDZ70707.1| YLR049Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190406088 - gi|190406088|gb|EDV09355.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
YL049_YEAST - Uncharacterized protein YLR049C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR049C ...
YLR049C - Putative protein of unknown function
0.0 [1..428] [1..428]

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Predicted Domain #1
Region A:
Residues: [1-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNNIMHEYV PPSQRLFHSR HRITRNDLKE EALHSGTTDW TTILDTTIDK DTNLISYAVP  60
   61 IIDNFAIPRA NSQGSPVAPS PNHRSTMYSS SSSSASSVFS DGLFTPNNNR NSSGSSSLVI 120
  121 RPQKNLSVDS LIQENKRKIN SEKESLSLIA NNNDETLCTH TDPSIQNLIK SETKRNILNL 180
  181 KFQNRNLFRR ELKLEKFWSN LRSCHTSGDE TDLLLVISKH NLYWFGIPND FRLPIYKRCL 240
  241 YHYSELDEAG FFSQYANNSL YLAIRKCCNN EEQETLSRSI FINLTKNVTW LNSRFDDNKD 300
  301 NKNSYTVTEG KFYQDFPNLY YHLKDKLKLN VIMDFIKPVI RNFMTNALNK HKLDGIGLEL 360
  361 LDILIVTTYY GPNKINAFLM DTFILNLLKQ CHYKFFVSNI SELVIQISKI DCDLVILLED 420
  421 LRSRIDLD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle