| Protein: | MLH2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 695 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MLH2.
| Description | E-value | Query Range |
Subject Range |
|
|
433.0 | [0..3] | [592..15] |
|
|
416.0 | [0..3] | [592..15] |
|
|
412.0 | [0..3] | [478..19] |
|
|
411.0 | [0..3] | [478..19] |
|
|
408.0 | [0..3] | [478..20] |
|
Region A: Residues: [1-221] |
1 11 21 31 41 51
| | | | | |
1 MTIHQLSPES QWKIVSSSFI YGPVAAVREL LDNSIDSGAK KVFIDVDSTT GGCEYISVKD 60
61 DGSGVDIIDR PSMCLEYTTS KMSSLGDISI LTTLGFRGEA LFLLSNLCNQ KGSMQVETKT 120
121 ADDVIGEKWL VDSKGGITNG KRYKVSCPVG TTVILRKLLG GLRARYLEIS SRPRKTFDEL 180
181 IYLINHYSLI HRNIRFYFSL VSLQKNGAIE RKQMQETLDP K
|
| Detection Method: |  |
| Confidence: | 257.529817 |
| Match: | 1ea6A |
| Description: | DNA mismatch repair protein PMS2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [222-394] |
1 11 21 31 41 51
| | | | | |
1 ISRARSLSLL ARLKKPVPLN FIVEENFVID EKINLDLILP RMVPESDVIN IKRRFKFLSV 60
61 NERALSLNLE TGKTISKLLS SIYRDFSLLD PMVWFINLNC DTKLLDVNIE PEKNDVMIKS 120
121 FEVIFKKIEN KLKLLLEERI GIETNMLGDK HVQPSINEKT SPALVIPTPD AEN
|
| Detection Method: | |
| Confidence: | 257.529817 |
| Match: | 1ea6A |
| Description: | DNA mismatch repair protein PMS2 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [395-512] |
1 11 21 31 41 51
| | | | | |
1 EISKGCGAVS GKDKTDIPQK NSDLIVPTFY DEANLENTTI VAATPSPTKF SEDKALDEQT 60
61 QLTISSYRSS SSGSMASEDS TNWRHNFQQE LSENSEVAGA GSSTLPSSLT YNYIETIP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.280 | N/A | N/A | a.8.4 | Description not found. |
| View | Download | 0.212 | N/A | N/A | d.15.6 | Superantigen toxins, C-terminal domain |
|
Region A: Residues: [513-695] |
1 11 21 31 41 51
| | | | | |
1 ENEDLELSKD ASISNPFMIT KIRNVNKKLS ENLLEAKRTS CGDANKRGMP NERQLSNTEK 60
61 KELIKLQQTY GKRNNTVDMT IPRNSKKKVT DNYIKKASCM HKTRPKLMHF SEYTNNYVYT 120
121 LKNEKIVKHD SDNFAKETLW LRSRDDATSP SSSLLQALRA HVKKPGHIEA TTNEWCLFTP 180
181 DSP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
