| Protein: | RLP24 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 199 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RLP24.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-54 | [1..163] | [1..161] |
|
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2.0E-53 | [1..163] | [1..161] |
|
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2.0E-46 | [1..199] | [1..199] |
|
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4.0E-45 | [1..165] | [1..163] |
|
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2.0E-43 | [1..159] | [1..159] |
|
|
6.0E-37 | [1..155] | [1..159] |
|
Region A: Residues: [1-61] |
1 11 21 31 41 51
| | | | | |
1 MRIYQCHFCS SPCYPGHGIM FVRNDAKEFR FCRSKCHKAF KQRRNPRKLK WTKAFRKAAG 60
61 K
|
| Detection Method: |  |
| Confidence: | 95.154902 |
| Match: | 1k5yS_ |
| Description: | No description for 1k5yS_ was found. |
|
Region A: Residues: [62-199] |
1 11 21 31 41 51
| | | | | |
1 ELAVDSTLTF AQRRNVPVRY NRELVATTLK AMARIEEIRQ KRERAFYKNR MRGNKEKDFL 60
61 RDKKLVESNP ELLRIREVEI ARKLAKEQER AESVSEQEES EEEEEDMEID SDEEEEEQLE 120
121 KQKILLKNRR RNTKKIAF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.727 | 0.029 | ribosomal large subunit biogenesis | a.63.1 | Apolipophorin-III |
| View | Download | 0.417 | 0.025 | ribosomal large subunit biogenesis | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.436 | 0.017 | ribosomal large subunit biogenesis | a.130.1 | Chorismate mutase II |
| View | Download | 0.524 | 0.010 | ribosomal large subunit biogenesis | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.458 | 0.009 | ribosomal large subunit biogenesis | a.167.1 | Porin chaperone SurA, peptide-binding domain |
| View | Download | 0.414 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.406 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.400 | N/A | N/A | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.384 | N/A | N/A | g.45.1 | Pyk2-associated protein beta ARF-GAP domain |
| View | Download | 0.377 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.343 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.334 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.321 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.317 | N/A | N/A | a.75.1 | Ribosomal protein S7 |
| View | Download | 0.296 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.274 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.258 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.253 | N/A | N/A | c.55.4 | Translational machinery components |
| View | Download | 0.250 | N/A | N/A | c.95.1 | Thiolase-like |
| View | Download | 0.250 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.250 | N/A | N/A | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.243 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.235 | N/A | N/A | c.50.1 | Macro domain-like |
| View | Download | 0.229 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.223 | N/A | N/A | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.222 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.220 | N/A | N/A | d.58.33 | Formylmethanofuran:tetrahydromethanopterin formyltransferase |
| View | Download | 0.217 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.214 | N/A | N/A | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.211 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.206 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.205 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.203 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.202 | N/A | N/A | a.47.2 | t-snare proteins |
