| Protein: | NSE1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 336 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NSE1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..336] | [1..336] |
|
|
3.0E-51 | [115..289] | [58..207] |
|
|
4.0E-25 | [115..228] | [81..170] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MEVHEEQVSA PVTGDATAKY LLQYILSARG ICHENALILA LMRLETDAST LNTEWSIQQW 60
61 VDKLNDYINA INVKLNLLGY KIIRINHGIG RNAVTLKAKQ NFESFED
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.733 | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.691 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.715 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.798 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.676 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.669 | a.141.1 | Frizzled cystein-rich domain |
| View | Download | 0.655 | a.74.1 | Cyclin-like |
| View | Download | 0.649 | a.66.1 | Transducin (alpha subunit), insertion domain |
| View | Download | 0.638 | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.618 | a.74.1 | Cyclin-like |
| View | Download | 0.609 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.592 | a.141.1 | Frizzled cystein-rich domain |
| View | Download | 0.581 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.570 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.560 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.541 | d.95.2 | Homing endonucleases |
| View | Download | 0.538 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.529 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.520 | d.95.2 | Homing endonucleases |
| View | Download | 0.514 | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.508 | a.24.4 | Hemerythrin |
| View | Download | 0.500 | d.74.5 | Hypothetical protein Yml108w |
| View | Download | 0.498 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.483 | b.60.1 | Lipocalins |
| View | Download | 0.481 | a.118.1 | ARM repeat |
| View | Download | 0.468 | a.39.1 | EF-hand |
| View | Download | 0.467 | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.466 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.465 | a.66.1 | Transducin (alpha subunit), insertion domain |
| View | Download | 0.464 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.463 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.461 | a.141.1 | Frizzled cystein-rich domain |
| View | Download | 0.459 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.454 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.447 | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.442 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.440 | d.45.1 | ClpS-like |
| View | Download | 0.426 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.411 | d.67.2 | Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
| View | Download | 0.406 | a.74.1 | Cyclin-like |
| View | Download | 0.405 | d.17.1 | Cystatin/monellin |
| View | Download | 0.402 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.402 | d.95.2 | Homing endonucleases |
| View | Download | 0.397 | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.396 | c.110.1 | D-Tyr tRNAtyr deacylase, DTD |
| View | Download | 0.395 | d.58.5 | GlnB-like |
| View | Download | 0.394 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.392 | a.74.1 | Cyclin-like |
| View | Download | 0.390 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.383 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.381 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.376 | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.376 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.371 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.370 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.370 | d.169.1 | C-type lectin-like |
| View | Download | 0.368 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.367 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.363 | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.361 | b.55.1 | PH domain-like |
| View | Download | 0.357 | a.24.3 | Cytochromes |
| View | Download | 0.354 | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.353 | b.115.1 | Fucose-binding lectin II (PA-IIL) |
| View | Download | 0.343 | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.342 | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.331 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.331 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.330 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.326 | d.205.1 | GTP cyclohydrolase I feedback regulatory protein, GFRP |
| View | Download | 0.325 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.325 | d.131.1 | DNA clamp |
| View | Download | 0.324 | a.24.4 | Hemerythrin |
| View | Download | 0.324 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.323 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.321 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.320 | d.68.3 | SirA-like |
| View | Download | 0.320 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.318 | d.45.1 | ClpS-like |
| View | Download | 0.317 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.313 | d.67.2 | Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
| View | Download | 0.310 | d.169.1 | C-type lectin-like |
| View | Download | 0.307 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.306 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.306 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.301 | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.301 | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.299 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.299 | a.101.1 | Uteroglobin-like |
| View | Download | 0.298 | a.39.1 | EF-hand |
| View | Download | 0.295 | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.294 | a.77.1 | DEATH domain |
| View | Download | 0.292 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.291 | a.69.2 | Ypt/Rab-GAP domain of gyp1p |
| View | Download | 0.288 | c.114.1 | YchN-like |
| View | Download | 0.287 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.286 | a.63.1 | Apolipophorin-III |
| View | Download | 0.286 | d.169.1 | C-type lectin-like |
| View | Download | 0.282 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.281 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.278 | d.95.2 | Homing endonucleases |
| View | Download | 0.278 | d.205.1 | GTP cyclohydrolase I feedback regulatory protein, GFRP |
| View | Download | 0.278 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.276 | c.52.2 | tRNA splicing endonuclease, C-terminal domain |
| View | Download | 0.276 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.276 | a.112.1 | Description not found. |
| View | Download | 0.274 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.272 | a.29.2 | Bromodomain |
| View | Download | 0.269 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.266 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.264 | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.263 | a.47.2 | t-snare proteins |
| View | Download | 0.263 | a.1.1 | Globin-like |
| View | Download | 0.262 | a.74.1 | Cyclin-like |
| View | Download | 0.261 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.261 | a.59.1 | PAH2 domain |
| View | Download | 0.261 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.259 | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.258 | a.19.1 | Fertilization protein |
| View | Download | 0.258 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.257 | a.74.1 | Cyclin-like |
| View | Download | 0.257 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.254 | a.74.1 | Cyclin-like |
| View | Download | 0.254 | a.64.1 | Saposin |
| View | Download | 0.254 | g.53.1 | TAZ domain |
| View | Download | 0.251 | a.5.3 | N-terminal domain of phosphatidylinositol transfer protein sec14p |
| View | Download | 0.250 | d.58.49 | YajQ-like |
| View | Download | 0.249 | a.77.1 | DEATH domain |
| View | Download | 0.249 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.249 | a.2.3 | Chaperone J-domain |
| View | Download | 0.248 | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.248 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.247 | a.1.1 | Globin-like |
| View | Download | 0.245 | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.245 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.245 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.243 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.243 | a.29.2 | Bromodomain |
| View | Download | 0.243 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.243 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.239 | a.46.1 | Methionine synthase domain |
| View | Download | 0.236 | c.9.1 | Barstar (barnase inhibitor) |
| View | Download | 0.236 | d.13.1 | HIT-like |
| View | Download | 0.234 | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.233 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.233 | a.130.1 | Chorismate mutase II |
| View | Download | 0.228 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.227 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.226 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.226 | d.79.1 | YjgF-like |
| View | Download | 0.225 | c.102.1 | Cell-division inhibitor MinC, N-terminal domain |
| View | Download | 0.223 | c.47.1 | Thioredoxin-like |
| View | Download | 0.223 | a.118.8 | TPR-like |
| View | Download | 0.219 | a.1.1 | Globin-like |
| View | Download | 0.216 | c.95.1 | Thiolase-like |
| View | Download | 0.215 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.215 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.214 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.214 | d.24.1 | Pili subunits |
| View | Download | 0.212 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.212 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.205 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.205 | d.58.33 | Formylmethanofuran:tetrahydromethanopterin formyltransferase |
| View | Download | 0.204 | d.95.2 | Homing endonucleases |
| View | Download | 0.202 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.202 | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.201 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
|
Region A: Residues: [108-204] |
1 11 21 31 41 51
| | | | | |
1 NTAIRAHNND YAVLQSIVLP ESNRFFVYVN LASTEETKLA TRFNQNEIEF MKWAIEQFMI 60
61 SGETIVEGPA LETSIIVKEV NRILVAATGD SNLAKWR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.653 | 0.933 | DNA repair | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.507 | 0.022 | cell proliferation | b.1.2 | Fibronectin type III |
| View | Download | 0.495 | 0.000 | DNA repair | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.429 | 0.000 | DNA repair | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.562 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.429 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.419 | N/A | N/A | b.1.18 | E set domains |
| View | Download | 0.368 | N/A | N/A | b.61.1 | Avidin/streptavidin |
| View | Download | 0.367 | N/A | N/A | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.345 | N/A | N/A | a.20.1 | PGBD-like |
| View | Download | 0.304 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.295 | N/A | N/A | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.289 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.279 | N/A | N/A | d.18.1 | ssDNA-binding transcriptional regulator domain |
| View | Download | 0.271 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.268 | N/A | N/A | d.15.5 | Staphylokinase/streptokinase |
| View | Download | 0.268 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.257 | N/A | N/A | c.55.5 | MTH1175-like |
| View | Download | 0.235 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.223 | N/A | N/A | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.222 | N/A | N/A | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.219 | N/A | N/A | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.211 | N/A | N/A | a.28.1 | ACP-like |
| View | Download | 0.205 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.202 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
|
Region A: Residues: [205-336] |
1 11 21 31 41 51
| | | | | |
1 KFSTFTVGST NLFQFQELTA TDIEDLLLRL CELKWFYRTQ EGKFGIDLRC IAELEEYLTS 60
61 MYNLNTCQNC HKLAIQGVRC GNESCREENE ETGENSLSQI WHVDCFKHYI THVSKNCDRC 120
121 GSSLITEGVY VI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.346 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.296 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.430 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.388 | d.79.2 | Tubulin/Dihydroxyacetone kinase C-terminal domain |
| View | Download | 0.281 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.276 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.267 | d.110.4 | SNARE-like |
| View | Download | 0.235 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.231 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.225 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.225 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.211 | a.7.1 | Spectrin repeat |
| View | Download | 0.208 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.205 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.205 | f.14.1 | Voltage-gated potassium channels |
