| Protein: | YLL066C |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1205 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLL066C.
| Description | E-value | Query Range |
Subject Range |
|
|
1550.0 | [0..1] | [1205..170] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MRTFTDFVSG APIVRSLQKS TIRRYGYNLA PHMFLLLHVD ELSIFSAYQA SLPGEKKVDT 60
61 ERLKRDLCPR KPIEIKYFSQ ICNDMMNKKD RLGDVLATAQ RIRRRYNKNG SSEPRLKTLD 120
121 GLTSERWIQW LGLESDYHCS FSST
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [145-643] |
1 11 21 31 41 51
| | | | | |
1 RNAEDVVAGE AASSDHDQKI SRVTRKRPRE PKSTNDILVA GQKLFGSSFE FRDLHQLRLC 60
61 HEIYMADTPS VAVQAPPGYG KTELFHLPLI ALASKGDVKY VSFLFVPYTV LLANCMIRLG 120
121 RCGCLNVAPV RNFIEEGCDG VTDLYVGIYD DLASTNFTDR IAAWENIVEC TFRTNNVKLG 180
181 YLIVDEFHNF ETEVYRQSQF GGITNLDFDA FEKAIFLSGT APEAVADAAL QRIGLTGLAK 240
241 KSMDINELKR SEDLSRGLSS YPTRMFNLIK EKSEVPLGHV HKIWKKVESQ PEEALKLLLA 300
301 LFEIEPESKA IVVASTTNEV EELACSWRKY FRVVWIHGKL GAAEKVSRTK EFVTDGSMRV 360
361 LIGTKLVTEG IDIKQLMMVI MLDNRLNIIE LIQGVGRLRD GGLCYLLSRK NSWAARNRKG 420
421 ELPPIKEGCI TEQVREFYGL ESKKGKKGQH VGCCGSRTDL SADTVELIER MDRLAEKQAT 480
481 ASMSIVALPS SFQESNSSD
|
| Detection Method: | |
| Confidence: | 164.0 |
| Match: | 1fuuA |
| Description: | Initiation factor 4a |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [644-712] |
1 11 21 31 41 51
| | | | | |
1 RCRKYCSSDE DSNTCIHGSA NASTNATTNS STNATTTAST NVRTSATTTA SINVRTSATT 60
61 TESTNSSTN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.528 | a.39.1 | EF-hand |
| View | Download | 0.520 | a.272.1 | Description not found. |
| View | Download | 0.464 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.431 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.391 | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.370 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.333 | d.222.1 | YbaB-like |
| View | Download | 0.330 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.297 | d.9.2 | Description not found. |
| View | Download | 0.296 | a.36.1 | Signal peptide-binding domain |
|
Region A: Residues: [713-819] |
1 11 21 31 41 51
| | | | | |
1 ATTTASTNVR TSATTTASIN VRTSATTTES TNSNTSATTT ESTDSNTSAT TTESTDSNTS 60
61 ATTTASTNSS TNATTTASTN SSTNATTTES TNASAKEDAN KDGNAED
|
| Detection Method: | |
| Confidence: | 2.30103 |
| Match: | 1ezgA |
| Description: | Insect cysteine-rich antifreeze protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [820-1205] |
1 11 21 31 41 51
| | | | | |
1 NRFHPVTDIN KESYKRKGSQ MVLLERKKLK AQFPNTSENM NVLQFLGFRS DEIKHLFLYG 60
61 IDIYFCPEGV FTQYGLCKGC QKMFGLCVCW AGQKVSYRRM AWEALAVERM LRNDEEYKEY 120
121 LEDIEPYHGD PVGYLKFFSV KRGEIYSQIQ RNYAWYLAIT RRRETISVLD STRGKQGSQV 180
181 FRMSGRQIKE LYYKVWSNLR ESKTEVLQYF LNWDEKKCRE EWEAKDDTVF VEALEKVGVF 240
241 QRLRSMTSAG LQGPQYVKLQ FSRHHRQLRS RYELSLGMHL RDQLALGVTP SKVPHWTAFL 300
301 SMLIGLFYNK TFRQKLEYLL EQISEVWLLP HWVDLANVEV LAADNTRVPL YMLMVAVHKE 360
361 LDSDDVPDGR FDIILLCRDS SREVGE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
