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View Structure Prediction Details

Protein: YLL065W
Organism: Saccharomyces cerevisiae
Length: 116 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLL065W.

Description E-value Query
Range
Subject
Range
YJ9Z_YEAST - Putative UPF0320 protein YJR162C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJR162C...
YJR162C - [DUBIOUS] Dubious open reading frame unlikely to encode a protein, based on available experimental a...
179.0 [0..1] [113..1]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQYIPLSNL PYSHIPLHHP SLTISTKCTR IIMHGTCLSG LYPVPFTHKV HHYPHFNIYI  60
   61 SFGDPKYCIT ALNTYVIPLL HHILTTQFIH TYFNIPTKSP PKSPKHKNYL SFNFTK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 52.508638
Match: PF04318.3
Description: No description for PF04318.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.707 N/A N/A c.16.1 Lumazine synthase
View Download 0.641 N/A N/A c.16.1 Lumazine synthase
View Download 0.609 N/A N/A c.52.2 tRNA splicing endonuclease, C-terminal domain
View Download 0.538 N/A N/A d.79.1 YjgF-like
View Download 0.537 N/A N/A c.16.1 Lumazine synthase


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle