| Protein: | FRA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 749 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRA1.
| Description | E-value | Query Range |
Subject Range |
|
|
639.0 | [0..18] | [748..16] |
|
|
616.0 | [0..14] | [749..9] |
|
|
605.0 | [0..33] | [747..31] |
|
|
579.0 | [0..105] | [749..6] |
|
|
574.0 | [0..105] | [749..6] |
|
|
573.0 | [0..105] | [749..49] |
|
|
572.0 | [0..88] | [749..62] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MTSKPSTSDG RAHSISHVPG THMRGTSASH SPRPFRPCAD CTCSPGLLSR QGRRASLFLR 60
61 QLENSRRSSS MLLNELKGAG GGS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.233 | a.74.1 | Cyclin-like |
| View | Download | 0.233 | a.74.1 | Cyclin-like |
| View | Download | 0.228 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.226 | a.3.1 | Cytochrome c |
| View | Download | 0.226 | a.3.1 | Cytochrome c |
| View | Download | 0.221 | a.4.1 | Homeodomain-like |
| View | Download | 0.209 | d.300.1 | Description not found. |
| View | Download | 0.209 | a.22.1 | Histone-fold |
|
Region A: Residues: [84-277] |
1 11 21 31 41 51
| | | | | |
1 SAGNGSVYSC DSLCAVNREV NTTDRLLKLR QEMKKHDLCC YIVPSCDEHQ SEYVSLRDQR 60
61 RAFISGFSGS AGVACITRDL LNFNDDHPDG KSILSTDGRY FNQARQELDY NWTLLRQNED 120
121 PITWQEWCVR EALEMAKGLG NKEGMVLKIG IDPKLITFND YVSFRKMIDT KYDAKGKVEL 180
181 VPVEENLVDS IWPD
|
| Detection Method: | |
| Confidence: | 8.2 |
| Match: | |
| Description: | No description for 1chmA was found. |
|
Region A: Residues: [278-451] |
1 11 21 31 41 51
| | | | | |
1 FETLPERPCN DLLLLKYEFH GEEFKDKKEK LLKKLNDKAS SATTGRNTFI VVALDEICWL 60
61 LNLRGSDIDY NPVFFSYVAI NEDETILFTN NPFNDDISEY FKINGIEVRP YEQIWEHLTK 120
121 ITSQASSAEH EFLIPDSASW QMVRCLNTST NANGAIAKKM TAQNFAIIHS PIDV
|
| Detection Method: | |
| Confidence: | 72.30103 |
| Match: | 1jawA |
| Description: | AMINOPEPTIDASE P FROM E. COLI LOW PH FORM |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [452-749] |
1 11 21 31 41 51
| | | | | |
1 LKSIKNDIEI KNAHKAQVKD AVCLVQYFAW LEQQLVGREA LIDEYRAAEK LTEIRKTQRN 60
61 FMGNSFETIS STGSNAAIIH YSPPVENSSM IDPTKIYLCD SGSQFLEGTT DITRTIHLTK 120
121 PTKEEMDNYT LVLKGGLALE RLIFPENTPG FNIDAIARQF LWSRGLDYKH GTGHGIGSFL 180
181 NVHEGPMGVG FRPHLMNFPL RAGNIISNEP GYYKDGEYGI RIESDMLIKK ATEKGNFLKF 240
241 ENMTVVPYCR KLINTKLLNE EEKTQINEYH ARVWRTIVHF LQPQSISYKW LKRETSPL
|
| Detection Method: | |
| Confidence: | 72.30103 |
| Match: | 1jawA |
| Description: | AMINOPEPTIDASE P FROM E. COLI LOW PH FORM |
| Matching Structure (courtesy of the PDB): |
|
