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View Structure Prediction Details

Protein: PAU17
Organism: Saccharomyces cerevisiae
Length: 124 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAU17.

Description E-value Query
Range
Subject
Range
PAU22_YEAST, PAU... - Seripauperin-22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PAU22 PE=3 SV=1, Seripau...
PAU21, PAU22 - Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelome...
gi|190407682 - gi|190407682|gb|EDV10949.1| protein PAU3 [Saccharomyces cerevisiae RM11-1a]
176.0 [0..1] [123..41]

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Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLTSIAAG VAAIAAGVAA APATTTLSPS DERVNLVELG VYVSDIRAHL AEYYMFQAAH  60
   61 PTETYPVEIA EAVFNYGDFT TMLTGIPADQ VTRVITGVPW YSTRLRPAIS SALSADGIYT 120
  121 AVPN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 57.958607
Match: PF00660.8
Description: No description for PF00660.8 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.947 N/A N/A a.216.1 Description not found.
View Download 0.874 N/A N/A a.216.1 Description not found.
View Download 0.867 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.846 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.846 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.836 N/A N/A a.216.1 Description not found.
View Download 0.805 N/A N/A a.24.17 Group V grass pollen allergen
View Download 0.763 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.730 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle