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View Structure Prediction Details

Protein: YLL023C
Organism: Saccharomyces cerevisiae
Length: 279 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLL023C.

Description E-value Query
Range
Subject
Range
POM33_YEAST - Pore membrane protein of 33 kDa OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=POM33 PE...
YLL023C - Protein of unknown function; highly conserved across species and orthologous to human TMEM33; may in...
0.0 [1..279] [1..279]
TTS1_SCHPO - Tetra-spanning protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tts1 PE=1 SV=1
SPBC1539.04 - conserved eukaryotic protein
4.0E-71 [19..257] [9..249]
gi|12838089 - gi|12838089|dbj|BAB24078.1| unnamed protein product [Mus musculus]
0.004 [37..252] [33..231]

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Predicted Domain #1
Region A:
Residues: [1-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSRPANNQG PPNLPARDKS LVQRFMAVAK SLQFAWFTGH SVVLISSILY LLKMSEFYYR  60
   61 SAYLGVIESF GIIIYQQFFT RNEPLQTQDA AATKASIKSR VAGLLKSEDV LYLVLANFWL 120
  121 FTPRFSFSLI PFFAFAVFHV LIYVEKVLLP KVFHLSSKDS SKILSFIDKF VVQYNDLCMH 180
  181 WVGTAELLIF ILVLFRAILC FQRSWIILVV YAIFIKLRYE NSKYMKAAFA QWRVRMDGII 240
  241 SHPSIPPFVK RAYNAIKMSL IRLSEYRLSG APQVTKKQN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DAAATKASIK SRVAGLLKSE DVLYLVLANF WLFTPRFSFS LIPFFAFAVF HVLIYVEKVL  60
   61 LPKVFHLSSK DSSKILSFID KFVVQYNDLC MHWVGTAELL IFILVLFRAI LCFQRSWIIL 120
  121 VVYAIFIKLR YENSKYMKAA FAQWRVRMDG IISHPSIPPF VKRAYNAIKM SLIRLSEYRL 180
  181 SGAPQVTKKQ N

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle