| Protein: | KNS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 737 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KNS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..737] | [1..737] |
|
|
0.0 | [1..655] | [145..833] |
|
|
0.0 | [22..673] | [108..737] |
|
|
0.0 | [178..678] | [4..467] |
|
|
0.0 | [178..678] | [4..468] |
|
|
0.0 | [170..639] | [21..482] |
|
Region A: Residues: [1-156] |
1 11 21 31 41 51
| | | | | |
1 MSQNIQIGTR KRSRANMNNS TTTGPANNTS SNKTFLDNFE ETRTNKLLDE MFARQNSFLT 60
61 DNLRNSLDLN QADNPLRPRQ HQHQLFLDNE NAIELDEEPR IINTTINNSN NHNSSRVDED 120
121 ADDDIIFIKE QPIQFSSPLI LPSSSSINNN NNIVTS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.610 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.329 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.320 | N/A | N/A | d.110.3 | PYP-like sensor domain (PAS domain) |
| View | Download | 0.316 | N/A | N/A | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.294 | N/A | N/A | a.39.1 | EF-hand |
|
Region A: Residues: [157-213] |
1 11 21 31 41 51
| | | | | |
1 NNPGCGTAAT SNSTYITTPK KFKKQRTISL PQLPLSKLSY QSNYFNVPDQ TNAIVPR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.405 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.264 | d.10.1 | DNA-binding domain |
| View | Download | 0.384 | g.41.8 | Zn-binding ribosomal proteins |
| View | Download | 0.230 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.280 | g.37.1 | C2H2 and C2HC zinc fingers |
|
Region A: Residues: [214-395] |
1 11 21 31 41 51
| | | | | |
1 VTQTENELLH LTGSCAKTLE GNKAVNLTIA HSTSPFSNPP AQIASLPQSN LKKQIGSSLR 60
61 KFTSNGSSES ASSNKSNFKT DKDGHYVYQE NDIFGSGGRF VVKDLLGQGT FGKVLKCIDN 120
121 KYEPNYVAVK VIRAVDRYRE AAKTELRILQ TILNNDPQGQ FQCLLLRECF DYKNHICLVT 180
181 DL
|
|
Region B: Residues: [650-677] |
1 11 21 31 41 51
| | | | | |
1 WNLPPEKNWS LINSKLAWKR QTHSSSSS
|
| Detection Method: | |
| Confidence: | 305.457575 |
| Match: | 1bmkA_ |
| Description: | MAP kinase p38 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [396-649] |
1 11 21 31 41 51
| | | | | |
1 YGRSIYDFMC SNGIARFPGS HIQAIARQLI RSVCFLHDLG IIHTDLKPEN ILICDETHIA 60
61 QKLPLKTVQS LSKRRREASK GKRKILKNPE IKIIDFGSAI FHYEYHPPVI STRHYRAPEI 120
121 VLGLGWSFPC DIWSIACVLV ELVIGESLYP IHENLEHMAM MQRINGTPFP TDIIDKMFYK 180
181 SKHKLGNSPS DLNSTVIKHF DRKTLSLQWP EKNKRGDTIT TEKSMKRVLQ SCDRLDIYIS 240
241 KVLKQDYGDS LSIN
|
| Detection Method: | |
| Confidence: | 305.457575 |
| Match: | 1bmkA_ |
| Description: | MAP kinase p38 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [678-737] |
1 11 21 31 41 51
| | | | | |
1 TTDELDKETF LFWYWFIDLL RKMFEFDPTK RITAKDALDH EWFNLGILDD GIATYNNTQG 60
61
|
| Detection Method: | |
| Confidence: | 9.63 |
| Match: | 1i09A |
| Description: | Glycogen synthase kinase-3 beta (Gsk3b) |
Matching Structure (courtesy of the PDB): |
|
