| Protein: | MMM1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 426 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MMM1.
| Description | E-value | Query Range |
Subject Range |
|
|
763.0 | [0..1] | [426..1] |
|
|
493.0 | [0..96] | [425..8] |
|
|
484.0 | [0..96] | [425..40] |
|
|
475.0 | [0..96] | [419..14] |
|
|
430.0 | [0..96] | [419..15] |
|
|
423.0 | [0..4] | [421..9] |
|
|
420.0 | [0..12] | [422..36] |
|
|
420.0 | [0..96] | [419..15] |
|
|
403.0 | [0..4] | [422..29] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MTDSENESTE TDSLMTFDDY ISKELPEHLQ RLIMENLKGS TTNDLKQTSN NSEFNVSKNG 60
61 SFKGLDDAIQ ALQMQSVLHP SSLG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.494 | a.159.2 | FF domain |
| View | Download | 0.489 | d.189.1 | PX domain |
| View | Download | 0.457 | a.74.1 | Cyclin-like |
| View | Download | 0.457 | a.74.1 | Cyclin-like |
| View | Download | 0.434 | a.112.1 | Description not found. |
| View | Download | 0.434 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.371 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.336 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.307 | a.144.1 | PABC (PABP) domain |
|
Region A: Residues: [85-426] |
1 11 21 31 41 51
| | | | | |
1 SLATSSKFSG WSFAQGFFVG QLSIVLLFIF FLKFFIFSDE PSKSKNPKPA ASRHRSKFKE 60
61 YPFISREFLT SLVRKGAKQH YELNEEAENE HLQELALILE KTYYNVDVHP AESLDWFNVL 120
121 VAQIIQQFRS EAWHRDNILH SLNDFIGRKS PDLPEYLDTI KITELDTGDD FPIFSNCRIQ 180
181 YSPNSGNKKL EAKIDIDLND HLTLGVETKL LLNYPKPGIA ALPINLVVSI VRFQACLTVS 240
241 LTNAEEFAST SNGSSSENGM EGNSGYFLMF SFSPEYRMEF EIKSLIGSRS KLENIPKIGS 300
301 VIEYQIKKWF VERCVEPRFQ FVRLPSMWPR SKNTREEKPT EL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
