| Protein: | TVP38 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 337 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TVP38.
| Description | E-value | Query Range |
Subject Range |
|
|
200.0 | [0..33] | [324..56] |
|
|
198.0 | [0..49] | [337..13] |
|
|
165.0 | [0..40] | [316..49] |
|
|
156.0 | [0..40] | [316..5] |
|
|
154.0 | [0..88] | [328..27] |
|
|
147.0 | [0..9] | [337..5] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MSQSYEAGNA NMGQGEDDEF DGYFEDFDND IMPNSNNGQR VGTNAGLSFN DEVNVNDDDF 60
61 LDIYNMSPRE RLMHNIRKNV QKLQFYFYSL RLWQQIIIVL LGIMLMIMGI LLLVFHNAIL 120
121 HKVVVTSNDL REKMSTHFIL MVLIFFVA
|
| Detection Method: |  |
| Confidence: | 7.55 |
| Match: | |
| Description: | No description for 1hu3A was found. |
|
Region A: Residues: [149-337] |
1 11 21 31 41 51
| | | | | |
1 FPPMIGYSLL STTTGLIYGV SFEGWVTLAL GSVTGSIASF VVFKTILHSR AEKLVHLNRR 60
61 FEALASILQE NNSYWILALL RLCPFPYSLT NGAIAGVYGI SVRNFSIANI ITTPKLFIYL 120
121 FIGSRVKSLA ESESTGSRVF DLVSIIITLL ILSLTAWLLY FKTKKRYLEL QNRDRQVSTD 180
181 QLPELSFEV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.717 | N/A | N/A | a.192.1 | Description not found. |
| View | Download | 0.656 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.611 | N/A | N/A | d.110.2 | GAF domain-like |
| View | Download | 0.611 | N/A | N/A | d.110.2 | GAF domain-like |
| View | Download | 0.560 | N/A | N/A | d.110.2 | GAF domain-like |
| View | Download | 0.560 | N/A | N/A | d.110.2 | GAF domain-like |
| View | Download | 0.550 | N/A | N/A | d.104.1 | Class II aaRS and biotin synthetases |
| View | Download | 0.539 | N/A | N/A | d.110.2 | GAF domain-like |
| View | Download | 0.480 | N/A | N/A | c.55.3 | Ribonuclease H-like |
