YRC Public Data Repository - Protein Structure Prediction

Protein:	DAD2
Organism:	Saccharomyces cerevisiae
Length:	133 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAD2.

Description	E-value	Query Range	Subject Range
DAD2_CANGA - DASH complex subunit DAD2 OS=Candida glabrata GN=DAD2 PE=3 SV=1 DAD2_CANGA - DASH complex subunit DAD2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / N...	103.0	[0..1]	[133..1]
DAD2_KLULA - DASH complex subunit DAD2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 12... DAD2_KLULA - DASH complex subunit DAD2 OS=Kluyveromyces lactis GN=DAD2 PE=3 SV=1	100.0	[0..3]	[129..2]
DAD2_ASHGO - DASH complex subunit DAD2 OS=Ashbya gossypii GN=DAD2 PE=3 SV=1 DAD2_ASHGO - DASH complex subunit DAD2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-10...	99.0	[0..11]	[129..10]
DAD2_DEBHA - DASH complex subunit DAD2 - Debaryomyces hansenii (Yeast) (Torulaspora hansenii) gi\|49653621, gi\|... - gi\|50418869\|ref\|XP_457955.1\| hypothetical protein DEHA0C06897g [Debaryomyces hansenii CBS767], gi\|49...	66.0	[0..4]	[133..12]
DAD2_YARLI - DASH complex subunit DAD2 OS=Yarrowia lipolytica GN=DAD2 PE=3 SV=1 DAD2_YARLI - DASH complex subunit DAD2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=DAD2 PE=3 SV=1	56.0	[0..4]	[78..20]
DAD2_CANAL - DASH complex subunit DAD2 OS=Candida albicans GN=DAD2 PE=3 SV=1 DAD2_CANAL - DASH complex subunit DAD2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DAD2 PE=3 SV=1	51.0	[0..3]	[72..7]

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Predicted Domain #1

Region A:
Residues: [1-133]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSIDEQIAI KRKELQSLQK ITSLTDGLKI QLTELNEQIK EMGMNADSVA QLMNNWDSII  60
   61 NNISQASLGL LQYAEGDYEI GPWKDSKKKE SEQSNETGLE AQENDKNDED NDEDEDLVPL 120
  121 PETMVRIRVD GNE

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	73.431798
Match:	PF08654.1
Description:	No description for PF08654.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits