YRC Public Data Repository - Protein Structure Prediction

Protein:	AIM29
Organism:	Saccharomyces cerevisiae
Length:	155 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM29.

Description	E-value	Query Range	Subject Range
AIM29 - Putative protein of unknown function; epitope-tagged protein localizes to the cytoplasm; YKR074W is ... AIM29_YEAST - Altered inheritance rate of mitochondria protein 29 OS=Saccharomyces cerevisiae (strain ATCC 204508 ... gi\|151941613 - gi\|151941613\|gb\|EDN59976.1\| conserved protein [Saccharomyces cerevisiae YJM789]	6.0E-65	[1..155]	[1..155]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	4.0E-56	[19..155]	[6..142]
SPAC2C4.04c - conserved eukaryotic protein YEY4_SCHPO - UPF0538 protein C2C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2C4.04c PE=3 ...	2.0E-48	[29..155]	[1..124]
gi\|12851650, gi\|... - gi\|148707852\|gb\|EDL39799.1\| RIKEN cDNA 3110009E18, isoform CRA_a [Mus musculus], gi\|12851650\|dbj\|BAB...	1.0E-28	[30..106]	[4..80]

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Predicted Domain #1

Region A:
Residues: [1-155]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSTKRLKMS TTFHDYDLEE PLTSNARPLK NSVITIRVIK SFPYRNVKNI VLHDYDLADK  60
   61 TAKDLFNDVL NKIQNEGSFR PFRNVKFDTL KIYTHAHGSK TVNLVINFDH DDDWTLDIEN 120
  121 DKKKLFEYGI ENETEISLFN KEDYLRFKEN PEEKW

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits