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View Structure Prediction Details

Protein: YKR047W
Organism: Saccharomyces cerevisiae
Length: 101 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKR047W.

Description E-value Query
Range
Subject
Range
gi|2131126 - gi|2131126|emb|CAA82126.1| unnamed protein product [Saccharomyces cerevisiae]
64.0 [0..45] [101..1]

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Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFNIYFSLH TYMYIHIYIY ICMYTYVYKY MNTVMTTLAK CVGIMTACIQ EPVPACQQNR  60
   61 LALRQIPRRH PPSRDHHLLL RLRPRPLLLR PPRTRIPRLR R

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.886 a.24.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
View Download 0.886 a.24.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
View Download 0.868 a.2.17 Description not found.
View Download 0.856 a.47.2 t-snare proteins
View Download 0.856 a.47.2 t-snare proteins
View Download 0.819 a.7.8 GAT domain
View Download 0.762 a.8.11 Description not found.
View Download 0.739 a.7.7 BAG domain
View Download 0.711 a.47.2 t-snare proteins
View Download 0.692 a.24.17 Group V grass pollen allergen


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle