YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YKR040C
Organism: Saccharomyces cerevisiae
Length: 167 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKR040C.

Description E-value Query
Range
Subject
Range
gi|2131124 - gi|2131124|emb|CAA82117.1| unnamed protein product [Saccharomyces cerevisiae]
4.0E-50 [1..123] [1..123]

Back

Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSFQAVSFA LGCNTLVACY AFTVLEKRSL MTSCTNALSF LFFLLTLRRI HRHWYKPYGA  60
   61 FLLIFVLTLR WFRGPIAWVV VDVVFASCNV VFFSPALSDE NWPYVSFFGV VVVIAVHIIV 120
  121 VTHIGAFTAC CLLKRVSLKS SEEKKKKKKK KKEKSLHTER EKKKKKF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle