| Protein: | ALY1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 915 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALY1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..915] | [1..915] |
|
|
0.0 | [12..904] | [9..981] |
|
|
4.0E-87 | [191..551] | [35..394] |
|
|
1.0E-86 | [191..551] | [35..394] |
|
|
2.0E-86 | [191..551] | [35..394] |
|
|
7.0E-84 | [191..555] | [38..381] |
|
Region A: Residues: [1-146] |
1 11 21 31 41 51
| | | | | |
1 MLQFNTENDT VAPVFPMEQD INAAPDAVPL VQTTTLQVFV KLAEPIVFLK GFETNGLSEI 60
61 APSILRGSLI VRVLKPNKLK SISITFKGIS RTEWPEGIPP KREEFSDVET VVNHTWPFYQ 120
121 ADDGMNSFTL EHHSSNNSSN RPSMSD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [147-291] |
1 11 21 31 41 51
| | | | | |
1 EDYLLEKSGA SVYIPPTAEP PKDNSNLSLD AYERNSLSSD NLSNKPVSSD VSHDDSKLLA 60
61 IQKTPLPSSS RRGSVPANFH GNSLSPHTFI SDLFTKTFSN SGATPSPEQE DNYLTPSKDS 120
121 KEVFIFRPGD YIYTFEQPIS QSYPE
|
|
Region B: Residues: [299-329] |
1 11 21 31 41 51
| | | | | |
1 SVEYKLSIDI ERFGAFKSTI HTQLPIKVVR L
|
|
Region C: Residues: [517-572] |
1 11 21 31 41 51
| | | | | |
1 NQLCSHANTL LPSYESHFQY CDEDGNFAPA ADQQNYASHH DSNIFFPKEV LSSPVL
|
| Detection Method: | |
| Confidence: | 87.522879 |
| Match: | 1jsyA_ |
| Description: | Arrestin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.637053679668866 | bayes_pls_golite062009 |
| protein binding | 0.29496902337062 | bayes_pls_golite062009 |
|
Region A: Residues: [292-298] |
1 11 21 31 41 51
| | | | | |
1 SIKANFG
|
|
Region B: Residues: [330-516] |
1 11 21 31 41 51
| | | | | |
1 PSDGSVEETE AIAISKDWKD LLHYDVVIFS KEIVLNAFLP IDFHFAPLDK VTLHRIRIYL 60
61 TESMEYTCNS NGNHEKARRL EPTKKFLLAE HNGPKLPHIP AGSNPLKAKN RGNILLDEKS 120
121 GDLVNKDFQF EVFVPSKFTN SIRLHPDTNY DKIKAHHWIK ICLRLSKKYG DNRKHFEISI 180
181 DSPIHIL
|
| Detection Method: | |
| Confidence: | 87.522879 |
| Match: | 1jsyA_ |
| Description: | Arrestin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [573-729] |
1 11 21 31 41 51
| | | | | |
1 SPNVQKMNIR IPSDLPVVRN RAESVKKSKS DNTSKKNDQS SNVFASKQLV ANIYKPNQIP 60
61 RELTSPQALP LSPITSPILN YQPLSNSPPP DFDFDLAKRG AADSHAIPVD PPSYFDVLKA 120
121 DGIELPYYDT SSSKIPELKL NKSRETLASI EEDSFNG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [730-915] |
1 11 21 31 41 51
| | | | | |
1 WSQIDDLSDE DDNDGDIASG FNFKLSTSAP SENVNSHTPI LQSLNMSLDG RKKNRASLHA 60
61 TSVLPSTIRQ NNQHFNDINQ MLGSSDEDAF PKSQSLNFNK KLPILKINDN VIQSNSNSNN 120
121 RVDNPEDTVD SSVDITAFYD PRMSSDSKFD WEVSKNHVDP AAYSVNVASE NRVLDDFKKA 180
181 FREKRK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
