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View Structure Prediction Details

Protein: YKL223W
Organism: Saccharomyces cerevisiae
Length: 110 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKL223W.

Description E-value Query
Range
Subject
Range
YIW0_YEAST - Putative UPF0377 protein YIR040C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIR040C...
YIR040C - [DUBIOUS] Dubious open reading frame unlikely to encode a protein, based on experimental and compara...
181.0 [0..1] [110..1]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMLLFLNES YIFHRLRMWS TVLWHSCVFV CVECENANYR VPRCLIKPFS VPVTFPFSVK  60
   61 KNIRILDLDP RTEAYCLSPY SVCSKRLPCK KYFYLLNSYN IKRVLGVVYC 

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle