| Protein: | UBA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1024 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBA1.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [7..1023] | [66..1078] |
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0.0 | [12..1023] | [41..1049] |
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0.0 | [2..1023] | [59..1078] |
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0.0 | [3..1024] | [2..1012] |
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0.0 | [4..1020] | [39..1053] |
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0.0 | [2..1020] | [181..1186] |
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Region A: Residues: [1-306] |
1 11 21 31 41 51
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1 MSSNNSGLSA AGEIDESLYS RQLYVLGKEA MLKMQTSNVL ILGLKGLGVE IAKNVVLAGV 60
61 KSMTVFDPEP VQLADLSTQF FLTEKDIGQK RGDVTRAKLA ELNAYVPVNV LDSLDDVTQL 120
121 SQFQVVVATD TVSLEDKVKI NEFCHSSGIR FISSETRGLF GNTFVDLGDE FTVLDPTGEE 180
181 PRTGMVSDIE PDGTVTMLDD NRHGLEDGNF VRFSEVEGLD KLNDGTLFKV EVLGPFAFRI 240
241 GSVKEYGEYK KGGIFTEVKV PRKISFKSLK QQLSNPEFVF SDFAKFDRAA QLHLGFQALH 300
301 QFAVRH
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| Detection Method: |  |
| Confidence: | 176.529817 |
| Match: | 1jw9B_ |
| Description: | Molybdenum cofactor biosynthesis protein MoeB |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [307-408] |
1 11 21 31 41 51
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1 NGELPRTMND EDANELIKLV TDLSVQQPEV LGEGVDVNED LIKELSYQAR GDIPGVVAFF 60
61 GGLVAQEVLK ACSGKFTPLK QFMYFDSLES LPDPKNFPRN EK
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.571 | a.4.1 | Homeodomain-like |
| View | Download | 0.478 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.476 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.503 | a.29.2 | Bromodomain |
| View | Download | 0.563 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.467 | a.5.3 | N-terminal domain of phosphatidylinositol transfer protein sec14p |
| View | Download | 0.442 | a.74.1 | Cyclin-like |
| View | Download | 0.436 | a.46.1 | Methionine synthase domain |
| View | Download | 0.407 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.373 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.362 | a.1.1 | Globin-like |
| View | Download | 0.361 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.355 | d.17.1 | Cystatin/monellin |
| View | Download | 0.351 | d.65.1 | Hedgehog/DD-pepidase |
| View | Download | 0.350 | a.39.1 | EF-hand |
| View | Download | 0.337 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.326 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.323 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.307 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.292 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.288 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.256 | a.4.1 | Homeodomain-like |
| View | Download | 0.252 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.231 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.228 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.228 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.225 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.222 | a.77.1 | DEATH domain |
| View | Download | 0.222 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.222 | a.29.2 | Bromodomain |
| View | Download | 0.220 | a.4.1 | Homeodomain-like |
| View | Download | 0.212 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.211 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.207 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.207 | d.58.8 | Viral DNA-binding domain |
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Region A: Residues: [409-620] |
1 11 21 31 41 51
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1 TTQPVNSRYD NQIAVFGLDF QKKIANSKVF LVGSGAIGCE MLKNWALLGL GSGSDGYIVV 60
61 TDNDSIEKSN LNRQFLFRPK DVGKNKSEVA AEAVCAMNPD LKGKINAKID KVGPETEEIF 120
121 NDSFWESLDF VTNALDNVDA RTYVDRRCVF YRKPLLESGT LGTKGNTQVI IPRLTESYSS 180
181 SRDPPEKSIP LCTLRSFPNK IDHTIAWAKS LF
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| Detection Method: | |
| Confidence: | 7.43 |
| Match: | 1eq2A |
| Description: | ADP-L-glycero-D-mannoheptose 6-epimerase |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [621-750] |
1 11 21 31 41 51
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1 QGYFTDSAEN VNMYLTQPNF VEQTLKQSGD VKGVLESISD SLSSKPHNFE DCIKWARLEF 60
61 EKKFNHDIKQ LLFNFPKDAK TSNGEPFWSG AKRAPTPLEF DIYNNDHFHF VVAGASLRAY 120
121 NYGIKSDDSN
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.336 | 0.377 | ubiquitin activating enzyme activity | a.39.1 | EF-hand |
| View | Download | 0.450 | 0.250 | ubiquitin activating enzyme activity | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.472 | 0.048 | ubiquitin activating enzyme activity | a.118.9 | ENTH/VHS domain |
| View | Download | 0.335 | 0.008 | ubiquitin activating enzyme activity | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.301 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.287 | N/A | N/A | a.21.1 | HMG-box |
| View | Download | 0.262 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.257 | N/A | N/A | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.256 | N/A | N/A | d.110.2 | GAF domain-like |
| View | Download | 0.244 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.239 | N/A | N/A | a.72.1 | Functional domain of the splicing factor Prp18 |
| View | Download | 0.239 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.238 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.232 | N/A | N/A | a.21.1 | HMG-box |
| View | Download | 0.223 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.222 | N/A | N/A | a.158.1 | F-box domain |
| View | Download | 0.220 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.220 | N/A | N/A | d.146.1 | Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain |
| View | Download | 0.217 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.209 | N/A | N/A | d.17.6 | Archaeosine tRNA-guanine transglycosylase, C2 domain |
| View | Download | 0.207 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.206 | N/A | N/A | a.3.1 | Cytochrome c |
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Region A: Residues: [751-813] |
1 11 21 31 41 51
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1 SKPNVDEYKS VIDHMIIPEF TPNANLKIQV NDDDPDPNAN AANGSDEIDQ LVSSLPDPST 60
61 LAG
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.431 | d.58.17 | Metal-binding domain |
| View | Download | 0.469 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.333 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.429 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.486 | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.323 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.312 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.258 | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.220 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.215 | d.58.24 | CheY-binding domain of CheA |
| View | Download | 0.210 | d.9.2 | Description not found. |
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Region A: Residues: [814-1024] |
1 11 21 31 41 51
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1 FKLEPVDFEK DDDTNHHIEF ITACSNCRAQ NYFIETADRQ KTKFIAGRII PAIATTTSLV 60
61 TGLVNLELYK LIDNKTDIEQ YKNGFVNLAL PFFGFSEPIA SPKGEYNNKK YDKIWDRFDI 120
121 KGDIKLSDLI EHFEKDEGLE ITMLSYGVSL LYASFFPPKK LKERLNLPIT QLVKLVTKKD 180
181 IPAHVSTMIL EICADDKEGE DVEVPFITIH L
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
