| Protein: | AIM27 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 260 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM27.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-79 | [27..245] | [2..214] |
|
|
1.0E-77 | [29..244] | [3..211] |
|
|
5.0E-76 | [28..241] | [4..213] |
|
|
5.0E-76 | [28..241] | [4..213] |
|
|
2.0E-74 | [29..244] | [3..216] |
|
|
2.0E-73 | [29..244] | [3..215] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MTINQHLQQL LFNRIDKTTS SIQQARAPQM LLDDQLKYWV LLPISIVMVL TGVLKQYIMT 60
61 LITGSSANEA QPRVKLTEWQ YLQWAQLLIG NGGNLSSDAF AAKKEFLVKD LTEERHLAKA 120
121 KQQDGSQAGE VP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.634 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.514 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.479 | a.2.7 | tRNA-binding arm |
| View | Download | 0.435 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.422 | a.118.8 | TPR-like |
| View | Download | 0.400 | a.47.2 | t-snare proteins |
| View | Download | 0.392 | a.47.2 | t-snare proteins |
| View | Download | 0.353 | a.118.8 | TPR-like |
| View | Download | 0.342 | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.339 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.334 | a.79.1 | Antitermination factor NusB |
| View | Download | 0.327 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.325 | a.7.1 | Spectrin repeat |
| View | Download | 0.319 | a.25.1 | Ferritin-like |
| View | Download | 0.305 | a.26.1 | 4-helical cytokines |
| View | Download | 0.302 | a.24.1 | Apolipoprotein |
| View | Download | 0.299 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.289 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.288 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.288 | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.283 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.278 | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
| View | Download | 0.268 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.263 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.236 | a.19.1 | Fertilization protein |
| View | Download | 0.234 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.234 | a.74.1 | Cyclin-like |
| View | Download | 0.232 | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.227 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.220 | a.63.1 | Apolipophorin-III |
| View | Download | 0.220 | a.1.2 | alpha-helical ferredoxin |
| View | Download | 0.218 | a.1.1 | Globin-like |
| View | Download | 0.216 | a.118.8 | TPR-like |
| View | Download | 0.214 | a.25.1 | Ferritin-like |
| View | Download | 0.213 | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.211 | a.39.1 | EF-hand |
| View | Download | 0.209 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.202 | a.47.1 | STAT |
| View | Download | 0.201 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
|
Region A: Residues: [133-260] |
1 11 21 31 41 51
| | | | | |
1 NPFNDPSMSN AMMNMAKGNM ASFIPQTIIM WWVNHFFAGF ILMQLPFPLT AKFKEMLQTG 60
61 IICQDLDVRW VSSISWYFIS VLGLNPVYNL IGLNDQDMGI QAGIGGPQAP KALHNHRLTK 120
121 QCMRWLTI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.421 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.345 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.340 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.298 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.275 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.257 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.256 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.243 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.237 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.225 | N/A | N/A | d.129.4 | Cell-division protein ZipA, C-terminal domain |
| View | Download | 0.216 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.212 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
