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View Structure Prediction Details

Protein: ADD66
Organism: Saccharomyces cerevisiae
Length: 267 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ADD66.

Description E-value Query
Range
Subject
Range
ADD66 - Protein involved in 20S proteasome assembly; forms a heterodimer with Pba1p that binds to proteasome...
gi|190409641 - gi|190409641|gb|EDV12906.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|207343694 - gi|207343694|gb|EDZ71081.1| YKL206Cp-like protein [Saccharomyces cerevisiae AWRI1631]
POC2_YEAST - Proteasome assembly chaperone 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADD66 PE...
0.0 [1..267] [1..267]
gi|89000905, gi|... - gi|9280311|dbj|BAB01690.1| unnamed protein product [Arabidopsis thaliana], gi|89000905|gb|ABD59042.1...
0.005 [2..254] [16..273]

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Predicted Domain #1
Region A:
Residues: [1-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCLVLPLVS VGNIPQLSID WLLNSQANEW EYLEALDSKY LVEFVGPLDR PEDGSDSLYK  60
   61 DADMKYSSAL EVFYNKKRGL FAIQQRTPLV SVNYLNNFIV EIILPFLSKY NISEICIWDS 120
  121 LYAMEDENGV IVRPQEVYSL GEFYFDDEAE LLSNLHLNDQ ESMVNNWLHF TPTSFQDKIS 180
  181 VDQPIFKILF QILNASQRPK ALRSIKYCSC LANEGDNSLD SQQFLQWIIS QKVIKNAPPI 240
  241 VKFVRPISWQ GAYGMADARD KFVDLYN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle