| Protein: | MNN4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1178 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MNN4.
| Description | E-value | Query Range |
Subject Range |
|
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541.0 | [0..1] | [639..1] |
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495.0 | [0..162] | [1177..1865] |
|
|
458.0 | [0..1] | [744..1] |
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384.0 | [0..202] | [1178..937] |
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384.0 | [0..202] | [1178..938] |
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382.0 | [0..202] | [1178..1040] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MLQRISSKLH RRFLSGLLRV KHYPLRRILL PLILLQIIII TFIWSNSPQR NGLGRDADYL 60
61 LPNYNELDSD DDSWYSILTS SFKNDRKIQF AKTLYENLKF GTNPKWVNEY TLQNDLLSVK 120
121 MGPRKGSKLE SVDELKFYDF DPRLTWSVVL NHLQNNDADQ PEKL
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.293 | N/A | N/A | d.379.1 | Description not found. |
| View | Download | 0.256 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.256 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.248 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.247 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.247 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.228 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.211 | N/A | N/A | c.23.5 | Flavoproteins |
| View | Download | 0.210 | N/A | N/A | a.25.1 | Ferritin-like |
|
Region A: Residues: [165-257] |
1 11 21 31 41 51
| | | | | |
1 PFSWYDWTTF HELNKLISID KTVLPCNFLF QSAFDKESLE AIETELGEPL FLYERPKYAQ 60
61 KLWYKAARNQ DRIKDSKELK KHCSKLFTPD GHG
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.602 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.559 | a.22.1 | Histone-fold |
| View | Download | 0.519 | c.49.1 | Pyruvate kinase, C-terminal domain |
| View | Download | 0.519 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.511 | c.84.1 | Phosphoglucomutase, first 3 domains |
| View | Download | 0.504 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.486 | c.5.1 | MurCD N-terminal domain |
| View | Download | 0.457 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.446 | c.84.1 | Phosphoglucomutase, first 3 domains |
| View | Download | 0.437 | c.5.1 | MurCD N-terminal domain |
|
Region A: Residues: [258-689] |
1 11 21 31 41 51
| | | | | |
1 SPKGLRFNTQ FQIKELYDKV RPEVYQLQAR NYILTTQSHP LSISIIESDN STYQVPLQTE 60
61 KSKNLVQSGL LQEYINDNIN STNKRKKNKQ DVEFNHNRLF QEFVNNDQVN SLYKLEIEET 120
121 DKFTFDKDLV YLSPSDFKFD ASKKIEELEE QKKLYPDKFS AHNENYLNSL KNSVKTSPAL 180
181 QRKFFYEAGA VKQYKGMGFH RDKRFFNVDT LINDKQEYQA RLNSMIRTFQ KFTKANGIIS 240
241 WLSHGTLYGY LYNGMAFPWD NDFDLQMPIK HLQLLSQYFN QSLILEDPRQ GNGRYFLDVS 300
301 DSLTVRINGN GKNNIDARFI DVDTGLYIDI TGLASTSAPS RDYLNSYIEE RLQEEHLDIN 360
361 NIPESNGETA TLPDKVDDGL VNMATLNITE LRDYITSDEN KNHKRVPTDT DLKDLLKKEL 420
421 EELPKSKTIE NK
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [690-1122] |
1 11 21 31 41 51
| | | | | |
1 LNPKQRYFLN EKLKLYNCRN NHFNSFEELS PLINTVFHGV PALIPHRHTY CLHNEYHVPD 60
61 RYAFDAYKNT AYLPEFRFWF DYDGLKKCSN INSWYPNIPS INSWNPNLLK EISSTKFESK 120
121 LFDSNKVSEY SFKNLSMDDV RLIYKNIPKA GFIEVFTNLY NSFNVTAYRQ KELEIQYCQN 180
181 LTFIEKKKLL HQLRINVAPK LSSPAKDPFL FGYEKAMWKD LSKSMNQTTL DQVTKIVHEE 240
241 YVGKIIDLSE SLKYRNFSLF NITFDETGTT LDDNTEDYTP ANTVEVNPVD FKSNLNFSSN 300
301 SFLDLNSYGL DLFAPTLSDV NRKGIQMFDK DPIIVYEDYA YAKLLEERKR REKKKKEEEE 360
361 KKKKEEEEKK KKEEEEKKKK EEEEKKKKEE EEKKKKEEEE KKKQEEEEKK KKEEEEKKKQ 420
421 EEGEKMKNED EEN
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| Detection Method: | |
| Confidence: | 16.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [1123-1178] |
1 11 21 31 41 51
| | | | | |
1 KKNEDEEKKK NEEEEKKKQE EKNKKNEDEE KKKQEEEEKK KNEEEEKKKQ EEGHSN
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.562 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.562 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.501 | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.492 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.492 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.491 | a.4.1 | Homeodomain-like |
| View | Download | 0.480 | a.4.1 | Homeodomain-like |
| View | Download | 0.385 | a.4.1 | Homeodomain-like |
| View | Download | 0.383 | a.4.1 | Homeodomain-like |
| View | Download | 0.361 | a.4.1 | Homeodomain-like |
