| Protein: | PTK1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 399 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTK1.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-94 | [1..388] | [1..417] |
|
|
5.0E-87 | [13..399] | [17..398] |
|
|
2.0E-81 | [99..399] | [23..324] |
|
|
2.0E-80 | [113..399] | [6..298] |
|
|
3.0E-80 | [171..399] | [1..238] |
|
|
5.0E-80 | [128..399] | [6..285] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MTVSHNHSTK ISQQPISSVS AFKFFGKKLL SSSHGNKLKK KASLPPDFHS TSTNDSESSS 60
61 PKLPNSLKTS RRANSFAHTT NSKRSLSSAS TKILPPAGSS TSISRGNRHS STSRNLSNSK 120
121 FSSERLVYNP YGVSTPSTSL SSVSTSMKKD PDLGFYLHD
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [160-248] |
1 11 21 31 41 51
| | | | | |
1 GDSKIRMLPI PIVDPNEYLP DEMKEASIQL SDNFVFDDEN KTIGWGGSCE VRKIRSKYRK 60
61 KDVFALKKLN MIYNETPEKF YNAAPKEFI
|
|
Region B: Residues: [262-284] |
1 11 21 31 41 51
| | | | | |
1 TFLLVKVPTT VYTTRGWGFV MEL
|
| Detection Method: | |
| Confidence: | 146.071898 |
| Match: | 1giiA_ |
| Description: | Cyclin-dependent PK, CDK2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [249-261] |
1 11 21 31 41 51
| | | | | |
1 IAKQLSHHVH ITN
|
|
Region B: Residues: [285-399] |
1 11 21 31 41 51
| | | | | |
1 GLRDLFAMIQ KSGWRHVALA EKFCIFKQVA CGVKFCHDQG IAHRDLKPEN VLLSPDGVCK 60
61 LTDFGISDWY HHGSTRPVQP CQEVRRDDRL AAVCSPGGHV LRLQEALRYG IATAV
|
| Detection Method: | |
| Confidence: | 146.071898 |
| Match: | 1giiA_ |
| Description: | Cyclin-dependent PK, CDK2 |
| Matching Structure (courtesy of the PDB): |
|
