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View Structure Prediction Details

Protein: YKL162C
Organism: Saccharomyces cerevisiae
Length: 402 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKL162C.

Description E-value Query
Range
Subject
Range
NDUF7_YEAST - NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 homolog OS=Saccharomyces cerevisiae (st...
YKL162C - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
0.0 [1..402] [1..402]

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Predicted Domain #1
Region A:
Residues: [1-402]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKRLHPLRI QVHLKSDYPL FTFEQLLSTN GIRRGQTARI SLKDYIEWQN FPNIMKRENF  60
   61 FTQRKPVTTT AKEEPFSFDN ILDCEPQFSK CLAKWLLVNY KLNDYPYYDL NIVNIYTDLP 120
  121 QAIQICKNLM SYLKSTLSDN MFQKIKYFMV PLYKCDKIPS KLLDGIPGSV SLVQDYPVSP 180
  181 YFLQKKFHIE DPIQILMLND VIKYTTHDLV RYSSDDKGWQ QCFVDINKNG QKSKSFDSAI 240
  241 DYSCELALEQ MFNDRSHVSP GKELYIPTKL IEILMTIKNN IPEHRLFIVD TPQRSSPTII 300
  301 SLLKSLISPR PTGSSQIVQP YSDSIFSDKR SGRICFMTDF LQLQNIYNGI NSSSSSCEVE 360
  361 DVADFVEKWI SPSERSTLSS QNGNRPQLED IKNSSLAVLH ST

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
catalytic activity 0.403277401956396 bayes_pls_golite062009
transferase activity 0.318650776741261 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle