| Protein: | RCN1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 211 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RCN1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..211] | [1..211] |
|
Region A: Residues: [1-211] |
1 11 21 31 41 51
| | | | | |
1 MGNIITDTII ITSDKCDIVD NDNVERIQVW LSKNILRKFQ INENEPLQLI ILKRFKRILL 60
61 ICPSHDISQH VMDASRALEM ENFNFSYSLQ DGQRNLTKQY LKVPESEKMF LISPPASPPP 120
121 EFDFSKCEDA PQRHIQSHIQ QDQQQRLEAS QLLPNNPDKN NNGTFTLLKS KVGAITIDRC 180
181 PTNDGNGQMQ LADHVKTAFP PKSIFDTDDD D
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 2.84044925655363 | bayes_pls_golite062009 |
| nucleic acid binding | 2.04283041527683 | bayes_pls_golite062009 |
| protein binding | 1.05805521997665 | bayes_pls_golite062009 |
| RNA binding | 0.772790649151098 | bayes_pls_golite062009 |
| mRNA binding | 0.0842863270573433 | bayes_pls_golite062009 |
|
Region A: Residues: [118-211] |
1 11 21 31 41 51
| | | | | |
1 PPPEFDFSKC EDAPQRHIQS HIQQDQQQRL EASQLLPNNP DKNNNGTFTL LKSKVGAITI 60
61 DRCPTNDGNG QMQLADHVKT AFPPKSIFDT DDDD
|
| Detection Method: | |
| Confidence: | 3.420216 |
| Match: | PF04847.3 |
| Description: | No description for PF04847.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
