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View Structure Prediction Details

Protein: MBR1
Organism: Saccharomyces cerevisiae
Length: 339 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MBR1.

Description E-value Query
Range
Subject
Range
MBR1 - Protein involved in mitochondrial functions and stress response; overexpression suppresses growth de...
MBR1_YEAST - Mitochondrial biogenesis regulation protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288...
0.0 [1..339] [1..339]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMEKTTDKP LSAGDMNDEY SRGPIDDIDC LNFFERAVQD PCCEACDTED ADEELRAKLS  60
   61 SFNFQPDSSP CNAKCQQTLN PLCKIDEALP AESELAPSRN GSVSEAN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.203 a.2.11 Fe,Mn superoxide dismutase (SOD), N-terminal domain
View Download 0.203 a.2.11 Fe,Mn superoxide dismutase (SOD), N-terminal domain

Predicted Domain #2
Region A:
Residues: [108-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDTNSIASTV HDPVDSKYGG MPSLRKAKTT SYFTSSSSNN TTMRNPLKKC NTNINGLLVN  60
   61 GRSSSSSRQS IPELFSGACT KKKNNVLLKS ETPNSEFSSN SLQHCNSRSF SLPRSRSRSS 120
  121 AIAIPTHLYG LEKYVSPGLD TLTADPEESI ERFSNNRPRE ISSCCPNDTG DTSSSLSHSN 180
  181 TSSSLNFPLG TNTNQFHQPR QPVQQQQSSK PNFGAGRKKS FIEMSLASSF AG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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