| Protein: | MUD2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 527 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MUD2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..527] | [1..527] |
|
|
1.0E-30 | [385..524] | [406..544] |
|
|
4.0E-30 | [379..524] | [613..748] |
|
|
8.0E-29 | [396..524] | [434..558] |
|
Region A: Residues: [1-392] |
1 11 21 31 41 51
| | | | | |
1 MADEKRLEDL RSKIMESIGK SEKDVVPIEN KRFNTDNAVI DTHFKRQKSD GELPKAPKSR 60
61 NVSHSNNRGP SSIITMSTNR TTYEQTRAGP HRQSYRDASG RSYNRENRYS SHNTGPQWNN 120
121 NPYNRQRDER RGRNERFDRR GRNGNGNYDR FNYQRKNEGS KFNGDRDKRQ LQTNKYDMNY 180
181 NSQNVMYPGS SFDSPAYYNM ASSKANSRLV ISGLSQSSDP SIVARLKDLL ENFISGLQKT 240
241 ESNAEDFKIS NFYIGEGRPD HIIVEFSSQI CSTMVLACRS FFNAKLGTFD LKWRRPNDYV 300
301 QQLDHLVDFC RGTVIALENL ENIGEGEDYR MKELFSSLNV TNGTAKPLFY KCSSNTNNTG 360
361 KESEFTKCIL LSFEVVTQDI LDKLKPYKWF KP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [393-527] |
1 11 21 31 41 51
| | | | | |
1 NDGKISQVTS WITFQSLPNL VTQSVRVESR VLLLLNCLDP LDLKDETFIT EIKETLKYSI 60
61 AGADTIKICQ PGVDYRLNFE NLASGAGNIY IKFKTLEAAK HAMEELPGTQ FNDRTVLCTY 120
121 IDEDDFDMME ATQLS
|
| Detection Method: | |
| Confidence: | 15.522879 |
| Match: | 1jmtA_ |
| Description: | U2AF35 (35 KDa subunit) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [416-527] |
1 11 21 31 41 51
| | | | | |
1 SVRVESRVLL LLNCLDPLDL KDETFITEIK ETLKYSIAGA DTIKICQPGV DYRLNFENLA 60
61 SGAGNIYIKF KTLEAAKHAM EELPGTQFND RTVLCTYIDE DDFDMMEATQ LS
|
| Detection Method: | |
| Confidence: | 27.221849 |
| Match: | 2pe8A |
| Description: | No description for 2pe8A was found. |
