YRC Public Data Repository - Protein Structure Prediction

Protein:	YKL061W
Organism:	Saccharomyces cerevisiae
Length:	113 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKL061W.

Description	E-value	Query Range	Subject Range
BLI1_CANGA - Biogenesis of lysosome-related organelles complex 1 subunit BLI1 OS=Candida glabrata (strain ATCC 20... gi\|49528156 - gi\|49528156\|emb\|CAG61813.1\| unnamed protein product [Candida glabrata]	60.0	[0..10]	[100..5]
gi\|45185291, gi\|... - gi\|45185291\|ref\|NP_983008.1\| ABR062Wp [Ashbya gossypii ATCC 10895], gi\|44980949\|gb\|AAS50832.1\| ABR06... BLI1_ASHGO - Biogenesis of lysosome-related organelles complex 1 subunit BLI1 OS=Ashbya gossypii (strain ATCC 108...	54.0	[0..4]	[100..3]

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Predicted Domain #1

Region A:
Residues: [1-113]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEQNKLYYD VEKLVNSLQE SFDLDCAQSV SLFTSKSRSN EAWLEELENK FKLKDDVELD  60
   61 DVENLRAEID MKLNMLEDKV SYYERLYKEL EEFQNEIKIK TVVNNRRQSR TPK

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.01
Match:	2ieqA
Description:	No description for 2ieqA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

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Top Sequence Alignment Hits