| Protein: | NFU1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 256 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NFU1.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-87 | [1..256] | [1..256] |
|
|
2.0E-79 | [13..252] | [61..278] |
|
|
1.0E-77 | [11..256] | [32..260] |
|
|
3.0E-77 | [3..234] | [56..268] |
|
|
4.0E-73 | [11..250] | [72..308] |
|
|
1.0E-69 | [10..235] | [40..249] |
|
Region A: Residues: [1-145] |
1 11 21 31 41 51
| | | | | |
1 MFKSVAKLGK SPIFYLNSQR LIHIKTLTTP NENALKFLST DGEMLQTRGS KSIVIKNTDE 60
61 NLINHSKLAQ QIFLQCPGVE SLMIGDDFLT INKDRMVHWN SIKPEIIDLL TKQLAYGEDV 120
121 ISKEFHAVQE EEGEGGYKIN MPKFE
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.721 | 0.892 | mitochondrial matrix | d.185.1 | LuxS/MPP-like metallohydrolase |
| View | Download | 0.711 | 0.003 | mitochondrial matrix | d.227.1 | OsmC-like |
| View | Download | 0.545 | 0.000 | mitochondrial matrix | d.58.21 | Molybdenum cofactor biosynthesis protein C, MoaC |
| View | Download | 0.588 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.480 | N/A | N/A | d.185.1 | LuxS/MPP-like metallohydrolase |
| View | Download | 0.462 | N/A | N/A | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.439 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.407 | N/A | N/A | d.89.1 | Origin of replication-binding domain, RBD-like |
| View | Download | 0.405 | N/A | N/A | d.58.21 | Molybdenum cofactor biosynthesis protein C, MoaC |
| View | Download | 0.405 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.382 | N/A | N/A | a.79.1 | Antitermination factor NusB |
| View | Download | 0.337 | N/A | N/A | d.198.2 | Arp2/3 complex subunits |
| View | Download | 0.335 | N/A | N/A | d.198.2 | Arp2/3 complex subunits |
| View | Download | 0.323 | N/A | N/A | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.320 | N/A | N/A | d.198.2 | Arp2/3 complex subunits |
| View | Download | 0.319 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.315 | N/A | N/A | d.185.1 | LuxS/MPP-like metallohydrolase |
| View | Download | 0.314 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.314 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.303 | N/A | N/A | c.95.1 | Thiolase-like |
| View | Download | 0.302 | N/A | N/A | d.74.3 | RBP11-like subunits of RNA polymerase |
| View | Download | 0.287 | N/A | N/A | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.286 | N/A | N/A | d.58.48 | MTH1187-like |
| View | Download | 0.285 | N/A | N/A | d.110.1 | Profilin (actin-binding protein) |
| View | Download | 0.277 | N/A | N/A | d.58.41 | SEA domain |
| View | Download | 0.275 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.274 | N/A | N/A | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.274 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.255 | N/A | N/A | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.249 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.245 | N/A | N/A | c.50.1 | Macro domain-like |
| View | Download | 0.239 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.230 | N/A | N/A | d.74.5 | Hypothetical protein Yml108w |
| View | Download | 0.227 | N/A | N/A | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.226 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.223 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.221 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.212 | N/A | N/A | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.211 | N/A | N/A | d.163.1 | DNA breaking-rejoining enzymes |
| View | Download | 0.210 | N/A | N/A | d.74.3 | RBP11-like subunits of RNA polymerase |
| View | Download | 0.208 | N/A | N/A | a.185.1 | Gametocyte protein Pfg27 |
| View | Download | 0.206 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.204 | N/A | N/A | d.74.3 | RBP11-like subunits of RNA polymerase |
| View | Download | 0.200 | N/A | N/A | d.74.5 | Hypothetical protein Yml108w |
| Term | Confidence | Notes |
| catalytic activity | 0.60409960326459 | bayes_pls_golite062009 |
|
Region A: Residues: [146-256] |
1 11 21 31 41 51
| | | | | |
1 LTEEDEEVSE LIEELIDTRI RPAILEDGGD IDYRGWDPKT GTVYLRLQGA CTSCSSSEVT 60
61 LKYGIESMLK HYVDEVKEVI QIMDPEQEIA LKEFDKLEKK LESSKNTSHE K
|
| Detection Method: | |
| Confidence: | 40.091515 |
| Match: | PF01106 |
| Description: | NifU-like domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 1.71550813147686 | bayes_pls_golite062009 |
| 2 iron, 2 sulfur cluster binding | 1.15693786817459 | bayes_pls_golite062009 |
| iron-sulfur cluster binding | 0.692336376163639 | bayes_pls_golite062009 |
| metal cluster binding | 0.692336376163639 | bayes_pls_golite062009 |
