| Protein: | THI11 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 340 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for THI11.
| Description | E-value | Query Range |
Subject Range |
|
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1.0E-76 | [1..338] | [1..338] |
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3.0E-75 | [1..340] | [1..340] |
|
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7.0E-72 | [1..338] | [1..338] |
|
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4.0E-70 | [1..336] | [1..336] |
|
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5.0E-68 | [1..336] | [1..336] |
|
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5.0E-66 | [1..332] | [1..331] |
|
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2.0E-62 | [1..332] | [1..334] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MSTDKITFLL NWQPTPYHIP IFLAQTKGYF KEQGLDIAIL EPTNPSDVTE LIGSGKVDMG 60
61 LKAMIHTLAA KARGFPVTSV ASLLDEP
|
|
Region B: Residues: [186-286] |
1 11 21 31 41 51
| | | | | |
1 RIDKLACLGC CCFCTVLYIC NDEFLKKNPE KVRKFLKAIK KATDYVLADP VKAWKEYIDF 60
61 KPQLNNDLSY KQYQRCYAYF SSSLYNVHRD WKKVTGYGKR L
|
| Detection Method: |  |
| Confidence: | 25.0 |
| Match: | 1gggA_ |
| Description: | Glutamine-binding protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [88-185] |
1 11 21 31 41 51
| | | | | |
1 FTGVLYLKGS GITEDFQSLK GKKIGYVGEF GKIQIDELTK HYGMKPEDYT AVRCGMNVAK 60
61 YIIEDKIDAG IGIECMQQVE LEEYLAKQGR PASDAKML
|
| Detection Method: | |
| Confidence: | 25.0 |
| Match: | 1gggA_ |
| Description: | Glutamine-binding protein |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [287-340] |
1 11 21 31 41 51
| | | | | |
1 AILPPDYVSN YTNEYLSWPE PEEVSDPLEA QRLMAIHQEK CRQEGTFKRL ALPA
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.353 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.393 | a.4.1 | Homeodomain-like |
| View | Download | 0.354 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.460 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.372 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.332 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.314 | a.101.1 | Uteroglobin-like |
| View | Download | 0.387 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.463 | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.298 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.452 | a.140.3 | Rho termination factor, N-terminal domain |
| View | Download | 0.413 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.446 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.421 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.358 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.346 | a.101.1 | Uteroglobin-like |
| View | Download | 0.342 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.335 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.316 | a.5.2 | UBA-like |
| View | Download | 0.303 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.302 | g.1.1 | Insulin-like |
| View | Download | 0.300 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.300 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.300 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.297 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.295 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.285 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.284 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.279 | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.277 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.273 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.271 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.271 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.267 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.257 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.243 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.242 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.240 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.239 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.236 | d.58.49 | YajQ-like |
| View | Download | 0.234 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.231 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.226 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.224 | a.4.1 | Homeodomain-like |
| View | Download | 0.220 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.216 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.215 | a.22.1 | Histone-fold |
| View | Download | 0.213 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.213 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.212 | a.30.1 | ROP protein |
| View | Download | 0.212 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.211 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.208 | d.58.17 | Metal-binding domain |
