| Protein: | DAN4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1161 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAN4.
| Description | E-value | Query Range |
Subject Range |
|
|
437.0 | [0..2] | [1160..1173] |
|
|
400.0 | [0..2] | [1160..423] |
|
|
324.0 | [0..3] | [1155..1189] |
|
|
308.0 | [0..2] | [1158..322] |
|
|
302.0 | [0..2] | [1160..314] |
|
|
287.0 | [0..46] | [1161..27] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MVNISIVAGI VALATSAAAI TATTTLSPYD ERVNLIELAV YVSDIRAHIF QYYSFRNHHK 60
61 TETYPSEIAA AVFDYGDFTT RLTGISGDEV TRMITGVPWY STRLKPAISS ALSKDGIYTA 120
121 IPTST
|
| Detection Method: |  |
| Confidence: | 63.744727 |
| Match: | PF00660 |
| Description: | Seripauperin and TIP1 family |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.953 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
|
Region A: Residues: [126-235] |
1 11 21 31 41 51
| | | | | |
1 STTTTKSSTS TTPTTTITST TSTTSTTPTT STTSTTPTTS TTSTTPTTST TSTTPTTSTT 60
61 STTPTTSTTS TTPTTSTTST TPTTSTTSTT PTTSTTSTTP TTSTTPTTST
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [236-623] |
1 11 21 31 41 51
| | | | | |
1 TSTTSQTSTK STTPTTSSTS TTPTTSTTPT TSTTSTAPTT STTSTTSTTS TISTAPTTST 60
61 TSSTFSTSSA SASSVISTTA TTSTTFASLT TPATSTASTD HTTSSVSTTN AFTTSATTTT 120
121 TSDTYISSSS PSQVTSSAEP TTVSEVTSSV EPTRSSQVTS SAEPTTVSEF TSSVEPTRSS 180
181 QVTSSAEPTT VSEFTSSVEP TRSSQVTSSA EPTTVSEFTS SVEPTRSSQV TSSAEPTTVS 240
241 EFTSSVEPTR SSQVTSSAEP TTVSEFTSSV EPIRSSQVTS SAEPTTVSEV TSSVEPIRSS 300
301 QVTTTEPVSS FGSTFSEITS SAEPLSFSKA TTSAESISSN QITISSELIV SSVITSSSEI 360
361 PSSIEVLTSS GISSSVEPTS LVGPSSDE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [624-862] |
1 11 21 31 41 51
| | | | | |
1 SISSTESLSA TSTFTSAVVS SSKAADFFTR STVSAKSDVS GNSSTQSTTF FATPSTPLAV 60
61 SSTVVTSSTD SVSPNIPFSE ISSSPESSTA ITSTSTSFIA ERTSSLYLSS SNMSSFTLST 120
121 FTVSQSIVSS FSMEPTSSVA SFASSSPLLV SSRSNCSDAR SSNTISSGLF STIENVRNAT 180
181 STFTNLSTDE IVITSCKSSC TNEDSVLTKT QVSTVETTIT SCSGGICTTL MSPVTTINA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [863-1161] |
1 11 21 31 41 51
| | | | | |
1 KANTLTTTET STVETTITTC PGGVCSTLTV PVTTITSEAT TTATISCEDN EEDITSTETE 60
61 LLTLETTITS CSGGICTTLM SPVTTINAKA NTLTTTETST VETTITTCSG GVCSTLTVPV 120
121 TTITSEATTT ATISCEDNEE DVASTKTELL TMETTITSCS GGICTTLMSP VSSFNSKATT 180
181 SNNAESTIPK AIKVSCSAGA CTTLTTVDAG ISMFTRTGLS ITQTTVTNCS GGTCTMLTAP 240
241 IATATSKVIS PIPKASSATS IAHSSASYTV SINTNGAYNF DKDNIFGTAI VAVVALLLL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
