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View Structure Prediction Details

Protein: ABM1
Organism: Saccharomyces cerevisiae
Length: 123 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ABM1.

Description E-value Query
Range
Subject
Range
YEL073C - Putative protein of unknown function; located adjacent to ARS503 and the telomere on the left arm of...
YEI3_YEAST - Uncharacterized protein YEL073C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YEL073C ...
102.0 [0..31] [101..17]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWRYSILTV DGSFKIFIPW EIFLTWNFLS AAWLNSTESN TYIHYSTCWG TSDYTLNISV  60
   61 IEATTEKLVD TRLLTTLENA TAWINSNSID EDEDDMPHAT NVADRLDGLS LSKRVYSICH 120
  121 YEF

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.826 a.24.9 alpha-catenin/vinculin
View Download 0.698 a.24.9 alpha-catenin/vinculin
View Download 0.652 a.24.18 Description not found.
View Download 0.602 a.8.4 Description not found.
View Download 0.560 a.1.1 Globin-like
View Download 0.560 a.1.1 Globin-like
View Download 0.511 a.1.1 Globin-like
View Download 0.501 a.1.1 Globin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle