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View Structure Prediction Details

Protein: YJR087W
Organism: Saccharomyces cerevisiae
Length: 116 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YJR087W.

Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVIESKKKK NIHAFSYPLS PYLFFSSNFG SVHILFKINS AVILSLLLDF AEISFSFDAD  60
   61 SLIKSFCLLR PSSREMMLTN AHPFRYSSLS STLLKAFFNA FSKSSVLVCF LLRRAS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.720 a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
View Download 0.696 a.1.1 Globin-like
View Download 0.696 a.1.1 Globin-like
View Download 0.641 d.224.1 SufE-like
View Download 0.606 a.7.6 Ribosomal protein S20
View Download 0.596 f.1.4 Bcl-2 inhibitors of programmed cell death
View Download 0.582 a.186.1 Description not found.
View Download 0.526 a.1.1 Globin-like
View Download 0.498 d.54.1 Enolase N-terminal domain-like
View Download 0.492 a.4.5 "Winged helix" DNA-binding domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle