| Protein: | MIR1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 311 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MIR1.
| Description | E-value | Query Range |
Subject Range |
|
|
9.0E-84 | [12..297] | [3..297] |
|
|
1.0E-83 | [1..299] | [178..471] |
|
|
2.0E-83 | [12..297] | [3..297] |
|
|
4.0E-83 | [12..297] | [3..297] |
|
|
4.0E-83 | [13..298] | [4..298] |
|
|
7.0E-83 | [12..297] | [3..297] |
|
Region A: Residues: [1-311] |
1 11 21 31 41 51
| | | | | |
1 MSVSAAPAIP QYSVSDYMKF ALAGAIGCGS THSSMVPIDV VKTRIQLEPT VYNKGMVGSF 60
61 KQIIAGEGAG ALLTGFGPTL LGYSIQGAFK FGGYEVFKKF FIDNLGYDTA SRYKNSVYMG 120
121 SAAMAEFLAD IALCPLEATR IRLVSQPQFA NGLVGGFSRI LKEEGIGSFY SGFTPILFKQ 180
181 IPYNIAKFLV FERASEFYYG FAGPKEKLSS TSTTLLNLLS GLTAGLAAAI VSQPADTLLS 240
241 KVNKTKKAPG QSTVGLLAQL AKQLGFFGSF AGLPTRLVMV GTLTSLQFGI YGSLKSTLGC 300
301 PPTIEIGGGG H
|
| Detection Method: |  |
| Confidence: | 7.75 |
| Match: | 1is2A |
| Description: | Peroxisomal acyl-CoA oxidase-II, domains 3 and 4; Peroxisomal acyl-CoA oxidase-II, domains 1 and 2 |
Matching Structure (courtesy of the PDB): |
|
