| Protein: | HOC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 396 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HOC1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..396] | [1..396] |
|
|
0.0 | [13..389] | [3..395] |
|
|
5.0E-95 | [41..389] | [1..365] |
|
|
6.0E-83 | [75..389] | [39..377] |
|
|
8.0E-51 | [97..375] | [63..336] |
|
|
8.0E-44 | [88..322] | [13..217] |
|
Region A: Residues: [1-328] |
1 11 21 31 41 51
| | | | | |
1 MAKTTKRASS FRRLMIFAII ALISLAFGVR YLFHNSNATD LQKILQNLPK EISQSINSAN 60
61 NIQSSDSDLV QHFESLAQEI RHQQEVQAKQ FDKQRKILEK KIQDLKQTPP EATLRERIAM 120
121 TFPYDSHVKF PAFIWQTWSN DEGPERVQDI KGMWESKNPG FAHEVLNHDV INALVHHYFY 180
181 SIPEILETYE ALPSIILKID FFKYLILLVH GGVYADIDTF PVQPIPNWIP EELSPSDIGL 240
241 IVGVEEDAQR ADWRTKYIRR LQFGTWIIQA KPGHPVLREI ISRIIETTLQ RKRDDQLNVN 300
301 LRNDLNIMSW TGSGLWTDTI FTYFNDFM
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| UDP-glycosyltransferase activity | 6.01354989568484 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 5.98555597307566 | bayes_pls_golite062009 |
| acetylgalactosaminyltransferase activity | 5.66606808201136 | bayes_pls_golite062009 |
| alpha-1,2-mannosyltransferase activity | 5.62955108548526 | bayes_pls_golite062009 |
| polypeptide N-acetylgalactosaminyltransferase activity | 5.60505224219681 | bayes_pls_golite062009 |
| mannosyltransferase activity | 5.1732667004955 | bayes_pls_golite062009 |
| transferase activity, transferring hexosyl groups | 4.02812104984198 | bayes_pls_golite062009 |
| transferase activity | 2.3313878748424 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.79751747857925 | bayes_pls_golite062009 |
| catalytic activity | 1.73979371332125 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.47767908405723 | bayes_pls_golite062009 |
| N-acetyllactosamine synthase activity | 0.925872529464618 | bayes_pls_golite062009 |
| lactose synthase activity | 0.925872529464618 | bayes_pls_golite062009 |
| cytidylyltransferase activity | 0.450701661234496 | bayes_pls_golite062009 |
| alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity | 0.386636074342689 | bayes_pls_golite062009 |
| binding | 0.165472828059574 | bayes_pls_golite062009 |
|
Region A: Residues: [329-396] |
1 11 21 31 41 51
| | | | | |
1 RSGVREKVTW KLFHNLNQPK LLSDVLVFPK FSFNCPNQID NDDPHKKFYF ITHLASQFWK 60
61 NTPKVEQK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.585 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.498 | a.2.7 | tRNA-binding arm |
| View | Download | 0.381 | a.140.4 | Recombination endonuclease VII, C-terminal and dimerization domains |
| View | Download | 0.443 | a.112.1 | Description not found. |
| View | Download | 0.380 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.368 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.366 | a.3.1 | Cytochrome c |
| View | Download | 0.352 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.349 | a.4.1 | Homeodomain-like |
| View | Download | 0.337 | a.64.1 | Saposin |
| View | Download | 0.335 | a.30.1 | ROP protein |
| View | Download | 0.333 | a.65.1 | Annexin |
| View | Download | 0.325 | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.324 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.319 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.267 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.254 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.253 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.239 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.228 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.223 | g.57.1 | Serine proteinase inhibitor lekti |
| View | Download | 0.219 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.217 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.213 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.212 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.211 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.205 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.203 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.203 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
