YRC Public Data Repository - Protein Structure Prediction

Protein:	OPI3
Organism:	Saccharomyces cerevisiae
Length:	206 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OPI3.

Description	E-value	Query Range	Subject Range
gi\|190409547 - gi\|190409547\|gb\|EDV12812.1\| unsaturated phospholipid N-methyltransferase [Saccharomyces cerevisiae R... gi\|207343828 - gi\|207343828\|gb\|EDZ71167.1\| YJR073Cp-like protein [Saccharomyces cerevisiae AWRI1631] PEM2_YEAST - Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 20450... OPI3 - Phospholipid methyltransferase (methylene-fatty-acyl-phospholipid synthase), catalyzes the last two ... gi\|151945140 - gi\|151945140\|gb\|EDN63391.1\| unsaturated phospholipid N-methyltransferase [Saccharomyces cerevisiae Y...	1.0E-90	[1..206]	[1..206]
CHO1_SCHPO - Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATC... cho1 - phosphatidyl-N-methylethanolamine N-methyltransferase	4.0E-77	[20..205]	[32..220]
gi\|22538478, gi\|... - gi\|6523815\|gb\|AAF14867.1\|AF113126_1 phosphotidylethanolamine N-methyltransferase [Homo sapiens], gi\|...	1.0E-74	[8..199]	[37..228]
PEMT_RAT - Phosphatidylethanolamine N-methyltransferase OS=Rattus norvegicus GN=Pemt PE=1 SV=2	1.0E-73	[9..199]	[1..191]
gi\|2209105 - gi\|2209105\|gb\|AAB61409.1\| phospholipid methyltransferase [Schizosaccharomyces pombe]	1.0E-68	[20..189]	[32..204]
gi\|14716994 - gi\|14716994\|emb\|CAC44161.1\| putative phosphatidylethanolamine N-methyltransferase [Oncorhynchus myki...	5.0E-27	[9..84]	[1..76]
gi\|18481698 - gi\|18481698\|gb\|AAL73521.1\| phosphatidylethanolamine N-methyltransferase [Macaca radiata]	4.0E-16	[147..199]	[1..53]

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Predicted Domain #1

Region A:
Residues: [1-132]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKESVQEIIQ QLIHSVDLQS SKFQLAIVCT MFNPIFWNIV ARMEYHKHSL TKMCGGARKG  60
   61 CYMLAATIFS LGIVRDMVYE SALREQPTCS LITGENWTKL GVALFGLGQV LVLSSMYKLG 120
  121 ITGTYLGDYF GI

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.813	N/A	N/A	a.7.2	Enzyme IIa from lactose specific PTS, IIa-lac

Predicted Domain #2

Region A:
Residues: [133-206]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LMDERVTGFP FNVSNNPMYQ GSTLSFLGIA LYKGKPAGLV VSAVVYFMYK IALRWEEPFT  60
   61 AMIYANRDKA KKNM

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits