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View Structure Prediction Details

Protein: BFA1
Organism: Saccharomyces cerevisiae
Length: 574 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BFA1.

Description E-value Query
Range
Subject
Range
BFA1_YEAST - Mitotic check point protein BFA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BFA1 PE...
BFA1 - Component of the GTPase-activating Bfa1p-Bub2p complex involved in multiple cell cycle checkpoint pa...
0.0 [1..574] [1..574]
byr4 - two-component GAP Byr4
BYR4_SCHPO - Protein byr4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=byr4 PE=1 SV=1
8.0E-52 [328..532] [489..643]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
7.0E-42 [328..440] [839..979]
gi|16416032 - gi|16416032|emb|CAB91382.2| related to cytokinesis inhibitor byr4 [Neurospora crassa]
9.0E-41 [328..440] [839..979]

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Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIRPLTLNG LDEPETSFEE LNTTLPRFQS HETLTLEENV PPLSTSTYIP PPSSVGTSDT  60
   61 GTVFSNSTSA FWSNKQADDD QDMEVDQDDE FLNDFQEFQN KKDDFDDAIK TNFHLRNGCR 120
  121 TGPFKNDIFA EEFDRKLSLE DKPRLKQPRS MMELKPKRKL SNSVTSRNLR SGNSVRFKKS 180
  181 MPNLALVNPA IREEEEDEER EREDQREFNY KIDNDTQDTI LAKFSSDDEG DFLTGFEELE 240
  241 GEAIDETISS NDKESADHPR FLKKSSSSLP LKISPAQYDI VKHDELLTPG LHRRQRDWNT 300
  301 QQELDSFKEK RSVRHCSNQN VQLNG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [326-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAKIKTIKQQ IDHNTPMKKG SMIYNPKTMK WEGNENVLSK FSDVDTANRK ALLIKNKLQR  60
   61 DADSKKQKYS DLQHARATSR NQKVIGNMIL DEQNLRWVSV SEEEADPFAG IPEIN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [441-574]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPPVGKSMKK RSSSPFLRSK SQVNTPFVSN DNDGVYQSTA AQARLRKYHS MRTLNGTTET  60
   61 PEISSTFHLS SRALEKFYHE ENRWCKKLAS WFIPRDETII SVDEETIMDE STVNSKRKSY 120
  121 MYEIRNMVIN STKD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [440-574]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLPPVGKSMK KRSSSPFLRS KSQVNTPFVS NDNDGVYQST AAQARLRKYH SMRTLNGTTE  60
   61 TPEISSTFHL SSRALEKFYH EENRWCKKLA SWFIPRDETI ISVDEETIMD ESTVNSKRKS 120
  121 YMYEIRNMVI NSTKD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle