| Protein: | UTR1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 530 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTR1.
| Description | E-value | Query Range |
Subject Range |
|
|
705.0 | [0..1] | [530..1] |
|
|
453.0 | [0..46] | [468..50] |
|
|
441.0 | [0..43] | [475..4] |
|
|
433.0 | [0..45] | [450..5] |
|
|
401.0 | [0..100] | [464..130] |
|
|
389.0 | [0..92] | [451..52] |
|
|
386.0 | [0..95] | [450..2] |
|
|
383.0 | [0..95] | [451..113] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MKENDMNNGV DKWVNEEDGR NDHHNNNNNL MKKAMMNNEQ IDRTQDIDNA KEMLRKISSE 60
61 SSSRRSSLLN KDSSLVNGNA NSGGGTSING TRGSSKSSNT HFQYASTAYG VRMLSKDISN 120
121 TKVEL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.270 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.246 | a.182.1 | GatB/YqeY domain |
| View | Download | 0.244 | a.74.1 | Cyclin-like |
|
Region A: Residues: [126-454] |
1 11 21 31 41 51
| | | | | |
1 DVENLMIVTK LNDVSLYFLT RELVEWVLVH FPRVTVYVDS ELKNSKKFAA GELCEDSKCR 60
61 ESRIKYWTKD FIREHDVFFD LVVTLGGDGT VLFVSSIFQR HVPPVMSFSL GSLGFLTNFK 120
121 FEHFREDLPR IMNHKIKTNL RLRLECTIYR RHRPEVDPNT GKKICVVEKL STHHILNEVT 180
181 IDRGPSPFLS MLELYGDGSL MTVAQADGLI AATPTGSTAY SLSAGGSLVC PTVNAIALTP 240
241 ICPHALSFRP IILPESINLK VKVSMKSRAP AWAAFDGKDR IELQKGDFIT ICASPYAFPT 300
301 VEASPDEFIN SISRQLNWNV REQQKSFTH
|
| Detection Method: | |
| Confidence: | 95.69897 |
| Match: | 2an1A |
| Description: | Structural Genomics, The crystal structure of a putative kinase from Salmonella typhimurim LT2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [455-530] |
1 11 21 31 41 51
| | | | | |
1 ILSQKNQEKY AHEANKVRNQ AEPLEVIRDK YSLEADATKE NNNGSDDESD DESVNCEACK 60
61 LKPSSVPKPS QARFSV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.355 | a.65.1 | Annexin |
| View | Download | 0.355 | a.65.1 | Annexin |
| View | Download | 0.322 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.275 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.252 | a.65.1 | Annexin |
| View | Download | 0.252 | a.65.1 | Annexin |
| View | Download | 0.230 | a.219.1 | Description not found. |
