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View Structure Prediction Details

Protein: YJR038C
Organism: Saccharomyces cerevisiae
Length: 120 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YJR038C.

Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTNSRLCPS SPSSSLIKHL TTSGGPSTSL TIMLSVIAIR ILPAGMRNWI RQALGSLLFA  60
   61 SFLLLSSFHY PITLTLVPVY HESLVKPTSA SFGGIRLSQL TMIMERRATP TCQDPSLTEV 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.870 a.118.9 ENTH/VHS domain
View Download 0.870 a.118.9 ENTH/VHS domain
View Download 0.828 a.118.11 Cytochrome c oxidase subunit E
View Download 0.828 c.103.1 Hypothetical protein MT938 (MTH938)
View Download 0.666 a.118.1 ARM repeat
View Download 0.666 a.118.1 ARM repeat
View Download 0.655 a.25.1 Ferritin-like
View Download 0.605 c.78.2 Aspartate/glutamate racemase
View Download 0.587 a.25.1 Ferritin-like
View Download 0.552 a.118.1 ARM repeat


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle